RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SMN1Q16637 294 aaKnown RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 MOGQ16653 247 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 SLC5A12Q1EHB4 618 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 IKBIPQ70UQ0 350 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 SLC9B2Q86UD5 537 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 AMZ2Q86W34 360 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 HEATR4Q86WZ0 1026 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 KRT78Q8N1N4 520 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 FNDC8Q8TC99 324 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 SUSD6Q92537 303 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 RHNO1Q9BSD3 238 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 ACAT2Q9BWD1 397 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 PRSS16Q9NQE7 514 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 SCN3BQ9NY72 215 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 ATG2AQ2TAZ0 1938 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 SH3PXD2BA1X283 911 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 PRAMEF25A6NGN4 478 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 TNFRSF11BO00300 401 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 ADAMDEC1O15204 470 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 MAN1A2O60476 641 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 BCAS1O75363 584 aaPredicted RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 PCCBP05166 539 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 NR4A1P22736 598 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 CHI3L1P36222 383 aaPredicted RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 MAP2K4P45985 399 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 MASP1P48740 699 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 ELOAQ14241 798 aaKnown RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 CYP2A13Q16696 494 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 ZNF829Q3KNS6 432 aaPredicted RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 ANKDD1AQ495B1 522 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 IFI44LQ53G44 452 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 PIP5KL1Q5T9C9 394 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 PNCKQ6P2M8 343 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 DSG4Q86SJ6 1040 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 RNF130Q86XS8 419 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 FAM81AQ8TBF8 368 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 GIPC3Q8TF64 312 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 FGF13Q92913 245 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 BORCS5Q969J3 196 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 UBE2FQ969M7 185 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 RAB7BQ96AH8 199 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 SLC6A16Q9GZN6 736 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 RAD21L1Q9H4I0 556 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 TAAR2Q9P1P5 351 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 HCN2Q9UL51 889 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 ZNF451Q9Y4E5 1061 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 MAP4K5Q9Y4K4 846 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 TBC1D3BA6NDS4 549 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 PLPP1O14494 284 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 WBP4O75554 376 aaKnown RBP13.92□□□□□ -0.18
TPM3-206ENST00000330188 KRT20P35900 424 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 PRIM2P49643 509 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 MLLT10P55197 1068 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 CDK6Q00534 326 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 CTF1Q16619 201 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 PROX2Q3B8N5 592 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 TRIM40Q6P9F5 258 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 ZBTB46Q86UZ6 589 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 ZNF540Q8NDQ6 660 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 OR4C15Q8NGM1 316 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 APH1BQ8WW43 257 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 HRASLS5Q96KN8 279 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 LGR4Q9BXB1 951 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 RASSF1Q9NS23 344 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 TM7SF3Q9NS93 570 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 WBP1LQ9NX94 342 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 TAC3Q9UHF0 121 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 ICKQ9UPZ9 632 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 PCDHGA6Q9Y5G7 932 aa13.92□□□□□ -0.18
TPM3-206ENST00000330188 PCDHGA12O60330 932 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 FAM20BO75063 409 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 CLPXO76031 633 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 MT-ND2P03891 347 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 EPHX1P07099 455 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ARAFP10398 606 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 SOAT1P35610 550 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 OPRD1P41143 372 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 OR1E2P47887 323 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 CDK3Q00526 305 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ZNF630Q2M218 657 aaPredicted RBP13.91□□□□□ -0.18
TPM3-206ENST00000330188 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 C17orf64Q86WR6 236 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ENTHD1Q8IYW4 607 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ZNF784Q8NCA9 323 aaPredicted RBP13.91□□□□□ -0.18
TPM3-206ENST00000330188 OR5K2Q8NHB8 316 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 RORBQ92753 470 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 KCNC2Q96PR1 638 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ZNF300Q96RE9 604 aaPredicted RBP13.91□□□□□ -0.18
TPM3-206ENST00000330188 ZNF347Q96SE7 839 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 FEVQ99581 238 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
TPM3-206ENST00000330188 RHBGQ9H310 441 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 EPS8L2Q9H6S3 715 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 PELI2Q9HAT8 420 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 MIEF1Q9NQG6 463 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 THSD1Q9NS62 852 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 CUEDC1Q9NWM3 386 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms