RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 ADAMTS18Q8TE60 1221 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 ANKRD49Q8WVL7 239 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 GAL3ST3Q96A11 431 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 TMEM125Q96AQ2 219 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 TSPAN17Q96FV3 270 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 NAPGQ99747 312 aaPredicted RBP16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 TRIM51Q9BSJ1 452 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 DEFB126Q9BYW3 111 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 DERL2Q9GZP9 239 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 KCNF1Q9H3M0 494 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 EHD1Q9H4M9 534 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 KLHL31Q9H511 634 aa16.57■□□□□ 0.24
PTPMT1-201ENST00000326656 ARHGAP10A1A4S6 786 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 LRIT2A6NDA9 550 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 FAM227AF5H4B4 570 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 CLDN4O14493 209 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 CLEC3AO75596 197 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 SLC25A12O75746 678 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 WDR47O94967 919 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 B3GALT4O96024 378 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 MAOAP21397 527 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 TPP2P29144 1249 aaPredicted RBP16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 CLCN2P51788 898 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 TSNQ15631 228 aaKnown RBP16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 MAPKAPK3Q16644 382 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 TOR1AIP1Q5JTV8 583 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 CEP97Q8IW35 865 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 KIF2BQ8N4N8 673 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 B3GNT7Q8NFL0 401 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 CDKL2Q92772 493 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 HES7Q9BYE0 225 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 NECTIN3Q9NQS3 549 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 TACC2O95359 2948 aa16.56■□□□□ 0.24
PTPMT1-201ENST00000326656 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 NPIPA5E9PKD4 350 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 EIF3HO15372 352 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 HTR1EP28566 365 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 BTN3A2P78410 334 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 RCN2Q14257 317 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 TGFBIQ15582 683 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 C3AR1Q16581 482 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 ADPRMQ3LIE5 342 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 ZNF468Q5VIY5 522 aaPredicted RBP16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 SCUBE1Q8IWY4 988 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 ZBED8Q8IZ13 594 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 EID3Q8N140 333 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 GHDCQ8N2G8 530 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 C7orf57Q8NEG2 295 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 PYROXD1Q8WU10 500 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 MS4A6EQ96DS6 147 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 TRIM31Q9BZY9 425 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 TXNDC16Q9P2K2 825 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 NPIPA1Q9UND3 350 aa16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 MRPS33Q9Y291 106 aaKnown RBP16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 KLF13Q9Y2Y9 288 aaPredicted RBP16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 NCOA6Q14686 2063 aaPredicted RBP16.55■□□□□ 0.24
PTPMT1-201ENST00000326656 ANKDD1BA6NHY2 528 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 KLRC4-KLRK1H3BQV0 150 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 B3GALT2O43825 422 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 WISP2O76076 250 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 WISP3O95389 354 aaPredicted RBP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 ZNF24P17028 368 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 GDF5P43026 501 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 RPL21P46778 160 aaKnown RBP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 SRSF11Q05519 484 aaKnown RBP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 CALCOCO2Q13137 446 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 ZNF460Q14592 562 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 FASTKD3Q14CZ7 662 aaKnown RBP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 SULT1C3Q6IMI6 304 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 MCEMP1Q8IX19 187 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 ZNF595Q8IYB9 648 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 APCDD1LQ8NCL9 501 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 OR2L5Q8NG80 312 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 PHF10Q8WUB8 498 aaKnown RBP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 WDR34Q96EX3 536 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 AICDAQ9GZX7 198 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 RHBGQ9H310 441 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 WHRNQ9P202 907 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 MEMO1Q9Y316 297 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 SNX24Q9Y343 169 aa16.54■□□□□ 0.24
PTPMT1-201ENST00000326656 FAM187AA6NFU0 413 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 CLGNO14967 610 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 ERI3O43414 337 aaKnown RBP16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 GSTA2P09210 222 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 PRF1P14222 555 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 TFEBP19484 476 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 RAB38P57729 211 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 TGM3Q08188 693 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 LAPTM5Q13571 262 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 RUNX2Q13950 521 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 SLBPQ14493 270 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 EFTUD2Q15029 972 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 ZNF227Q86WZ6 799 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms