RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PRAMEF10O60809 474 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 POP7O75817 140 aaKnown RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 FURINP09958 794 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 PCSK2P16519 638 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 TIGD6Q17RP2 521 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ZNF605Q86T29 641 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 MCFD2Q8NI22 146 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 GGHQ92820 318 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 REPS1Q96D71 796 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 FAM32AQ9Y421 112 aaKnown RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 A0A1W2PRB8 838 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 TNFRSF21O75509 655 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 GADD45AP24522 165 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-201ENST00000320755 HNRNPFP52597 415 aaKnown RBP16.67■□□□□ 0.26
COL9A1-201ENST00000320755 NIPAL1Q6NVV3 410 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 STX19Q8N4C7 294 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 OR6Q1Q8NGQ2 317 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 OR9A1PQ8NGU1 263 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 IPCEF1Q8WWN9 437 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-201ENST00000320755 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 PITX2Q99697 317 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 NEURL2Q9BR09 285 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 ITPAQ9BY32 194 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 BHLHE41Q9C0J9 482 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-201ENST00000320755 GGT2P36268 569 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 TGFBR2P37173 567 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 CRISP3P54108 245 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 DMC1Q14565 340 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 TNFAIP8L2Q6P589 184 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-201ENST00000320755 SLC5A11Q8WWX8 675 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 SLC6A16Q9GZN6 736 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 ZNF556Q9HAH1 456 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 TBC1D14Q9P2M4 693 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 DUSP12Q9UNI6 340 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 B3GNT3Q9Y2A9 372 aa16.67■□□□□ 0.26
COL9A1-201ENST00000320755 ANTXRLA6NF34 631 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 MAGP20916 626 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 VEGFBP49765 207 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CBX3Q13185 183 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 DHCR24Q15392 516 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 RPS26P11Q5JNZ5 115 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-201ENST00000320755 OR52N2Q8NGI0 321 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 DACH2Q96NX9 599 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 VPS35Q96QK1 796 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 ABCB10Q9NRK6 738 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 TAS2R9Q9NYW1 312 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 ATP6V1G1O75348 118 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 EPCAMP16422 314 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 PORP16435 677 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CTSKP43235 329 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 C21orf58P58505 322 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 ELP6Q0PNE2 266 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 ZNF77Q15935 545 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 TRIM40Q6P9F5 258 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 SZRD1Q7Z422 152 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 SFTPA1Q8IWL2 248 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-201ENST00000320755 MFSD4AQ8N468 514 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 S100ZQ8WXG8 99 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 SLC38A4Q969I6 547 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 DTD2Q96FN9 168 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 VMP1Q96GC9 406 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 EFCAB11Q9BUY7 163 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CFHR5Q9BXR6 569 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 ABCG4Q9H172 646 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CCDC177Q9NQR7 707 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-201ENST00000320755 C1GALT1Q9NS00 363 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 ATP6V1HQ9UI12 483 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 PSORS1C1Q9UIG5 152 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 PCYT1BQ9Y5K3 369 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-201ENST00000320755 GPR37L1O60883 481 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 SOD1P00441 154 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 RXRGP48443 463 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CD97P48960 835 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 DUSP7Q16829 419 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 MICAQ29983 383 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 NXPE4Q6UWF7 544 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CAMKMTQ7Z624 323 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 TAGAPQ8N103 731 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 CPA6Q8N4T0 437 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 OR5AR1Q8NGP9 310 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 GABARAPL3Q9BY60 117 aa16.66■□□□□ 0.26
COL9A1-201ENST00000320755 SLIRPQ9GZT3 109 aaKnown RBP16.66■□□□□ 0.26
COL9A1-201ENST00000320755 TRBC2A0A5B9 178 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 ANKDD1BA6NHY2 528 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 M0R082 166 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 ST3GAL4Q11206 333 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 FNDC3BQ53EP0 1204 aaKnown RBP16.65■□□□□ 0.26
COL9A1-201ENST00000320755 ZNF547Q8IVP9 402 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 DNAJC22Q8N4W6 341 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 RHOXF1Q8NHV9 184 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 PHF10Q8WUB8 498 aaKnown RBP16.65■□□□□ 0.26
COL9A1-201ENST00000320755 RAB8BQ92930 207 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms