RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CFL2Q9Y281 166 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 CIB4A0PJX0 185 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 ISM1B1AKI9 464 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 ITGAMP11215 1152 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 CLDN8P56748 225 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 ATAT1Q5SQI0 421 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 SPOUT1Q5T280 376 aaKnown RBP13.65□□□□□ -0.22
PABPC1-201ENST00000318607 HJURPQ8NCD3 748 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-201ENST00000318607 GPR150Q8NGU9 434 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 GRPEL2Q8TAA5 225 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 ZIC5Q96T25 663 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 MAU2Q9Y6X3 613 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 WDR87Q6ZQQ6 2873 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 A0A1W2PPK0 400 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 CLDN24A6NM45 220 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 TBKBP1A7MCY6 615 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 HYAL3O43820 417 aaPredicted RBP13.65□□□□□ -0.23
PABPC1-201ENST00000318607 B3GALNT1O75752 331 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 GASTP01350 101 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 YES1P07947 543 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 RPL9P32969 192 aaKnown RBP13.65□□□□□ -0.23
PABPC1-201ENST00000318607 CCT3P49368 545 aaKnown RBP13.65□□□□□ -0.23
PABPC1-201ENST00000318607 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.234e-13■■■■□ 24.9
PABPC1-201ENST00000318607 NFATC2Q13469 925 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.23
PABPC1-201ENST00000318607 PTOV1Q86YD1 416 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 SLC39A13Q96H72 371 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 ZNF226Q9NYT6 803 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 CRNNQ9UBG3 495 aaPredicted RBP13.65□□□□□ -0.23
PABPC1-201ENST00000318607 TRPC4Q9UBN4 977 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 MKLN1Q9UL63 735 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 SSR3Q9UNL2 185 aa13.65□□□□□ -0.23
PABPC1-201ENST00000318607 GABRR3A8MPY1 467 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 HNRNPCL2B2RXH8 293 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 RTCAO00442 366 aaKnown RBP13.64□□□□□ -0.23
PABPC1-201ENST00000318607 WNT9AO14904 365 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 NOS1APO75052 506 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-201ENST00000318607 OR2B3O76000 313 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 AVPR1BP47901 424 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 MAP4K2Q12851 820 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 TATDN3Q17R31 274 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 C11orf65Q8NCR3 313 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 MYO19Q96H55 970 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 C1QTNF6Q9BXI9 259 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 BARHL1Q9BZE3 327 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 STMN3Q9NZ72 180 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 NDUFAF4Q9P032 175 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 SNX7Q9UNH6 387 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 MBLAC1A4D2B0 266 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-201ENST00000318607 C2orf78A6NCI8 922 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 PRKACBP22694 351 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 RFX2P48378 723 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 YBEYP58557 167 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-201ENST00000318607 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
PABPC1-201ENST00000318607 KEAP1Q14145 624 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 MBTPS1Q14703 1052 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 NFE2Q16621 373 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-201ENST00000318607 WSCD2Q2TBF2 565 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 TTLL9Q3SXZ7 439 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 PMEPA1Q969W9 287 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 SLC35A5Q9BS91 424 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 ZDHHC6Q9H6R6 413 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 ZNF224Q9NZL3 707 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
PABPC1-201ENST00000318607 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 E7EQ34 232 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 ADAM12O43184 909 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 GPC1P35052 558 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 HNF1BP35680 557 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 GGT2P36268 569 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 RORCP51449 518 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
PABPC1-201ENST00000318607 SPHARQ15513 63 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 GPAT3Q53EU6 434 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 BRAT1Q6PJG6 821 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 RSPO2Q6UXX9 243 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-201ENST00000318607 CCDC117Q8IWD4 279 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-201ENST00000318607 DOK4Q8TEW6 326 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 C8orf48Q96LL4 319 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 NRTNQ99748 197 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 KLHL1Q9NR64 748 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 AOC2O75106 756 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 ETHE1O95571 254 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 BPIP17213 487 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 CCR7P32248 378 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 OR1D2P34982 312 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 CSKP41240 450 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 RPL6Q02878 288 aaKnown RBP13.63□□□□□ -0.23
PABPC1-201ENST00000318607 POU4F3Q15319 338 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 IRAK1BP1Q5VVH5 260 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 APCDD1Q8J025 514 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 DNAJC5GQ8N7S2 189 aa13.63□□□□□ -0.23
PABPC1-201ENST00000318607 WFDC5Q8TCV5 224 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms