RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PHC2Q8IXK0 858 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OR4C15Q8NGM1 316 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM163Q8TC26 289 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SH3RF2Q8TEC5 729 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CLP1Q92989 425 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZSWIM3Q96MP5 696 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 FAM129BQ96TA1 746 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 C7orf50Q9BRJ6 194 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MMP28Q9H239 520 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PPA2Q9H2U2 334 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM38AQ9H6F2 299 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ASB8Q9H765 288 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TRPV2Q9Y5S1 764 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OR6C75A6NL08 312 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 FAAHO00519 579 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SH3BP5O60239 455 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 AP2A2O94973 939 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ARSBP15848 533 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CBLP22681 906 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 POU1F1P28069 291 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 UQCRC1P31930 480 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 GSTM5P46439 218 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SSX1Q16384 188 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 DUSP6Q16828 381 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 EXOC3L2Q2M3D2 409 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CLLU1Q5K131 121 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 PRAMEF18Q5VWM3 479 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 KIAA1211LQ6NV74 962 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SERPINA9Q86WD7 417 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 GALNT11Q8NCW6 608 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 OR52N2Q8NGI0 321 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SMG7Q92540 1137 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 IGSF8Q969P0 613 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RTP3Q9BQQ7 232 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SLC12A9Q9BXP2 914 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 POLDIP3Q9BY77 421 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ACTR6Q9GZN1 396 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 AP5M1Q9H0R1 490 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 POLR2J3Q9H1A7 115 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 EMC7Q9NPA0 242 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 EIF3KQ9UBQ5 218 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ELF5Q9UKW6 265 aaPredicted RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 EXOSC1Q9Y3B2 195 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 Q9Y3F1 56 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RNF215Q9Y6U7 377 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 AXIN1O15169 862 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CHST10O43529 356 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 AKAP8O43823 692 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 OAZ2O95190 189 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 MPC1LP0DKB6 136 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CYP2A6P11509 494 aaPredicted RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 BRCC3P46736 316 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 TUFMP49411 452 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CPT1AP50416 773 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CLDN20P56880 219 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CYP4F2P78329 520 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 KCNJ10P78508 379 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CDK6Q00534 326 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF91Q05481 1191 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 HYAL2Q12891 473 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 UPP1Q16831 310 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 PLK5Q496M5 336 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 LIPJQ5W064 366 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF730Q6ZMV8 503 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 C16orf62Q7Z3J2 963 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 Q8N402 240 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 FAM26EQ8N5C1 309 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 NANOGP1Q8N7R0 232 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 MDGA1Q8NFP4 955 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 PPP1R13LQ8WUF5 828 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM40Q8WWA1 233 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 NR4A3Q92570 626 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF578Q96N58 590 aaPredicted RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 LIN7BQ9HAP6 207 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 C12orf4Q9NQ89 552 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 PLSCR3Q9NRY6 295 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ABCB8Q9NUT2 735 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 POLHQ9Y253 713 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SESN1Q9Y6P5 492 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 C5orf58C9J3I9 102 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 I3L521 148 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 QSOX1O00391 747 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RNASET2O00584 256 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 AMD1P17707 334 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ACVRL1P37023 503 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 KIR2DL3P43628 341 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RHOAP61586 193 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RGS1Q08116 209 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RAB40BQ12829 278 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 KLHL17Q6TDP4 642 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 UBE2FQ969M7 185 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 C1GALT1C1Q96EU7 318 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 TCF25Q9BQ70 676 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 HDHD5Q9BXW7 423 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 GSX2Q9BZM3 304 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 CRISPLD1Q9H336 500 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 GPSM3Q9Y4H4 160 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 FKBP7Q9Y680 259 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 MYH9P35579 1960 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms