RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 MVKQ03426 396 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 C5orf22Q49AR2 442 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 RSBN1Q5VWQ0 802 aaPredicted RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 TRIQKQ629K1 86 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 FEZF1A0PJY2 475 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 MFN2O95140 757 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 MPIP34949 423 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 MAP2K4P45985 399 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 MTAPQ13126 283 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 FADDQ13158 208 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 LASP1Q14847 261 aaKnown RBP12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 LARS2Q15031 903 aaKnown RBP12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 NEK10Q6ZWH5 1172 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 NAGSQ8N159 534 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 OR4E2Q8NGC2 313 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 OR5AR1Q8NGP9 310 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 CAB39Q9Y376 341 aaPredicted RBP12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 F5P12259 2224 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 TAF4O00268 1085 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 ASNA1O43681 348 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 TSPAN12O95859 305 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 S100A1P23297 94 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 FEN1P39748 380 aaKnown RBP12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 RNF111Q6ZNA4 994 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 ANKRD33Q7Z3H0 272 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 HTRA1Q92743 480 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 TRNAU1APQ9NX07 287 aaKnown RBP12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 FXYD1O00168 92 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 RPLP0P05388 317 aaKnown RBP12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 LAMP2P13473 410 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 AVPR1BP47901 424 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 XKP51811 444 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 CRB2Q5IJ48 1285 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 DTD2Q96FN9 168 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 ADAP2Q9NPF8 381 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 DKK3Q9UBP4 350 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 OR1A2Q9Y585 309 aa12.88□□□□□ -0.35
PCDHB9-201ENST00000316105 LRRC72A6NJI9 287 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 WASH3PC4AMC7 463 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 LATO43561 262 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 CLPXO76031 633 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 CXCL10P02778 98 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ITGA1P56199 1179 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 COPZ1P61923 177 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 RBBP4Q09028 425 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 NPRL3Q12980 569 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 RAPSNQ13702 412 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 CAMKK1Q8N5S9 505 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 C16orf78Q8WTQ4 265 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 UBTD2Q8WUN7 234 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF480Q8WV37 535 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 BHLHE41Q9C0J9 482 aaPredicted RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 DPEP2Q9H4A9 486 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ACSL5Q9ULC5 683 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 HEBP2Q9Y5Z4 205 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 AGRPO00253 132 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 INMTO95050 263 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 CYP17A1P05093 508 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 UQCRC2P22695 453 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TMBIM6P55061 237 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 VBP1P61758 197 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 MRPL28Q13084 256 aaKnown RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF234Q14588 700 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 HNRNPA1L2Q32P51 320 aaKnown RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TOR1AIP1Q5JTV8 583 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 SHQ1Q6PI26 577 aaKnown RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TAF8Q7Z7C8 310 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 PTRH1Q86Y79 214 aaKnown RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TESCQ96BS2 214 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 FAM129BQ96TA1 746 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TUBA1CQ9BQE3 449 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 C1QTNF3Q9BXJ4 246 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 MIR1-1HGQ9H1L0 117 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 DCSTAMPQ9H295 470 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 IL21Q9HBE4 155 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 CALML5Q9NZT1 146 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 A0A0J9YVX5 310 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 MID1O15344 667 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 MT-ND2P03891 347 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 HRH2P25021 359 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 MC1RQ01726 317 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 KCNC4Q03721 635 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 RGNQ15493 299 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TCEAL5Q5H9L2 206 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 NHSL2Q5HYW2 709 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 LILRA3Q8N6C8 439 aaPredicted RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 SETD7Q8WTS6 366 aaKnown RBP12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 SLCO4A1Q96BD0 722 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 FEVQ99581 238 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 OLAHQ9NV23 265 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 PTGFRNQ9P2B2 879 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms