RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 UBQLNLQ8IYU4 475 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 STK40Q8N2I9 435 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 METTL4Q8N3J2 472 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 OR2T29Q8NH02 315 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 HUS1BQ8NHY5 278 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 MAGED4Q96JG8 741 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 PPP3R2Q96LZ3 170 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CENPOQ9BU64 300 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 EMILIN2Q9BXX0 1053 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 MFRPQ9BY79 579 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ARMC7Q9H6L4 198 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CAAP1Q9H8G2 361 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SLC28A3Q9HAS3 691 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 MYNNQ9NPC7 610 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CNOT2Q9NZN8 540 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SELENONQ9NZV5 590 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 FCF1Q9Y324 198 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 IQCMA0A1B0GVH7 501 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 H3BMH7 237 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 DKK1O94907 266 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 MED26O95402 600 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 PRAMEF1O95521 474 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 TIMP2P16035 220 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 CTNNB1P35222 781 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 OCLNQ16625 522 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 MICAQ29983 383 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 KIAA1614Q5VZ46 1190 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 SDE2Q6IQ49 451 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 TCTN3Q6NUS6 607 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 SCIMPQ6UWF3 145 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 NCCRP1Q6ZVX7 275 aaPredicted RBP7.46□□□□□ -1.21
CNOT4-201ENST00000315544 PRICKLE2Q7Z3G6 844 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 LYPD6Q86Y78 171 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 PEX5LQ8IYB4 626 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 CYP4Z2PQ8N1L4 340 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 PLA2G15Q8NCC3 412 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 PDZD8Q8NEN9 1154 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 TMEM169Q96HH4 297 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 HEPHQ9BQS7 1158 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 STOX2Q9P2F5 926 aaPredicted RBP7.46□□□□□ -1.21
CNOT4-201ENST00000315544 ADGRE2Q9UHX3 823 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 ICAM5Q9UMF0 924 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 YIPF1Q9Y548 306 aa7.46□□□□□ -1.21
CNOT4-201ENST00000315544 C16orf96A6NNT2 1141 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 CLCA1A8K7I4 914 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 C1orf105O95561 183 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ARAFP10398 606 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 PRPS2P11908 318 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 DNAJA1P31689 397 aaKnown RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 HTR3AP46098 478 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 MECP2P51608 486 aaKnown RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 DMPKQ09013 629 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 NFYCQ13952 458 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 TEAD4Q15561 434 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF684Q5T5D7 378 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 STPG1Q5TH74 334 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 LYPLAL1Q5VWZ2 237 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 LAYNQ6UX15 382 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 TPRG1Q6ZUI0 275 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 PARP16Q8N5Y8 322 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 CORO1BQ9BR76 489 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 BHLHE41Q9C0J9 482 aaPredicted RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ERVMER34-1Q9H9K5 563 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 FAM120CQ9NX05 1096 aaKnown RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 WNT16Q9UBV4 365 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 BCAP29Q9UHQ4 241 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 EXOGQ9Y2C4 368 aaKnown RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 WDR37Q9Y2I8 494 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 AP3M1Q9Y2T2 418 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 GPC6Q9Y625 555 aaPredicted RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ISPDA4D126 451 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 HTR3EA5X5Y0 456 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 C2CD4DB7Z1M9 353 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 SCG5P05408 212 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 PABPC1P11940 636 aaKnown RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 DDOSTP39656 456 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 RPS14P62263 151 aaKnown RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 EPS8Q12929 822 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 MMP21Q8N119 569 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 TRIM63Q969Q1 353 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ASB16Q96NS5 453 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 RPRD1AQ96P16 312 aaPredicted RBP7.46□□□□□ -1.22
CNOT4-201ENST00000315544 TCF25Q9BQ70 676 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 BDH2Q9BUT1 245 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ZDHHC5Q9C0B5 715 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ISYNA1Q9NPH2 558 aa7.46□□□□□ -1.22
CNOT4-201ENST00000315544 ANTXRLA6NF34 631 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ANKRD61A6NGH8 418 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 H0Y626 953 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 CFLARO15519 480 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 KATNA1O75449 491 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 AP2A2O94973 939 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 SLC2A4P14672 509 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 EPCAMP16422 314 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 HMOX2P30519 316 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 GNPDA1P46926 289 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 TAS2R38P59533 333 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 RPP38P78345 283 aaKnown RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 SF1Q15637 639 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms