RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 HSD3B2P26439 372 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 DCDC1P59894 354 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 TP53BP2Q13625 1128 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 PARS2Q7L3T8 475 aaKnown RBP24.27■■□□□ 1.48
HOXB3-201ENST00000311626 TRMT11Q7Z4G4 463 aaKnown RBP24.27■■□□□ 1.48
HOXB3-201ENST00000311626 OR4C15Q8NGM1 316 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 RHOXF1Q8NHV9 184 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 MOSPD3O75425 235 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 FURINP09958 794 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 POU1F1P28069 291 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 RPS26P11Q5JNZ5 115 aaPredicted RBP24.27■■□□□ 1.48
HOXB3-201ENST00000311626 ZNF697Q5TEC3 545 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.27■■□□□ 1.48
HOXB3-201ENST00000311626 STARD8Q92502 1023 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 HHIPL1Q96JK4 782 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 TMEM165Q9HC07 324 aa24.27■■□□□ 1.48
HOXB3-201ENST00000311626 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.27■■□□□ 1.48
HOXB3-201ENST00000311626 PIPSLA2A3N6 862 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 TLL1O43897 1013 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 DNTTP04053 509 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 ANKRD33Q7Z3H0 272 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CACTIN-AS1Q8N1I8 211 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CLIP4Q8N3C7 705 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 TIFAQ96CG3 184 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 BCL7BQ9BQE9 202 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 DMRT3Q9NQL9 472 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 ADAMDEC1O15204 470 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CDK1P06493 297 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 PPIBP23284 216 aaKnown RBP24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CD40LGP29965 261 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 WDR5P61964 334 aaKnown RBP24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CDK6Q00534 326 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 ELP6Q0PNE2 266 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 TEAD4Q15561 434 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 MICAQ29983 383 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 ZNF805Q5CZA5 627 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CAMKMTQ7Z624 323 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 STX19Q8N4C7 294 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 ZNF675Q8TD23 568 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 HTRA1Q92743 480 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 C1GALT1Q9NS00 363 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 MS4A12Q9NXJ0 267 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 OGDHLQ9ULD0 1010 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CORO2BQ9UQ03 480 aa24.26■■□□□ 1.47
HOXB3-201ENST00000311626 GOLGA4Q13439 2230 aaKnown RBP24.26■■□□□ 1.47
HOXB3-201ENST00000311626 CLCA1A8K7I4 914 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 RTCAO00442 366 aaKnown RBP24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ZNF197O14709 1029 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 IL3P08700 152 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ST3GAL4Q11206 333 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 DOC2BQ14184 412 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ZNF605Q86T29 641 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.25■■□□□ 1.47
HOXB3-201ENST00000311626 HPS1Q92902 700 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 CHCHD6Q9BRQ6 235 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 C5AR2Q9P296 337 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ATP6V1HQ9UI12 483 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 DUSP12Q9UNI6 340 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 DYRK1BQ9Y463 629 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 CLDN24A6NM45 220 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 MMP12P39900 470 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 CTSKP43235 329 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ERVFC1P60507 584 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 FAM83FQ8NEG4 500 aaPredicted RBP24.25■■□□□ 1.47
HOXB3-201ENST00000311626 FAM129BQ96TA1 746 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 BHLHE41Q9C0J9 482 aaPredicted RBP24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ABCG4Q9H172 646 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 ZNF229Q9UJW7 825 aa24.25■■□□□ 1.47
HOXB3-201ENST00000311626 PCYT1BQ9Y5K3 369 aaPredicted RBP24.25■■□□□ 1.47
HOXB3-201ENST00000311626 TBX1O43435 398 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 C1GALT1C1LP0DN25 315 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 FADDQ13158 208 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 DPPA4Q7L190 304 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 PSD4Q8NDX1 1056 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 OR52N2Q8NGI0 321 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 Q96MT0 163 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 CENPOQ9BU64 300 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 ITM2CQ9NQX7 267 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 PLXND1Q9Y4D7 1925 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 PLXNA2O75051 1894 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 GTF2E2P29084 291 aaKnown RBP24.24■■□□□ 1.47
HOXB3-201ENST00000311626 GRK3P35626 688 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 NNMTP40261 264 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 MAGEA10P43363 369 aaPredicted RBP24.24■■□□□ 1.47
HOXB3-201ENST00000311626 ZNF33BQ06732 778 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 NFE2L1Q14494 772 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 DUSP7Q16829 419 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 LEXMQ3ZCV2 418 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 TCEAL5Q5H9L2 206 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 PLPP4Q5VZY2 271 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 PLEKHG7Q6ZR37 379 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 CCDC149Q6ZUS6 474 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 ZDHHC4Q9NPG8 344 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 ACER3Q9NUN7 267 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 IMPAD1Q9NX62 359 aa24.24■■□□□ 1.47
HOXB3-201ENST00000311626 CAB39Q9Y376 341 aaPredicted RBP24.24■■□□□ 1.47
HOXB3-201ENST00000311626 IGFBP1P08833 259 aaPredicted RBP24.23■■□□□ 1.47
HOXB3-201ENST00000311626 ADORA3P0DMS8 318 aa24.23■■□□□ 1.47
HOXB3-201ENST00000311626 MYDGFQ969H8 173 aa24.23■■□□□ 1.47
HOXB3-201ENST00000311626 SPATA9Q9BWV2 254 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms