RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM71E1Q6IPT2 247 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 RNF44Q7L0R7 432 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 NET1Q7Z628 596 aaPredicted RBP6.63□□□□□ -1.35
PTCD2-201ENST00000308077 GATAD2AQ86YP4 633 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 MSRB3Q8IXL7 192 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 SLC15A3Q8IY34 581 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 MINDY1Q8N5J2 469 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 FAM156AQ8NDB6 213 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 TRPV3Q8NET8 790 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 BAHD1Q8TBE0 780 aaPredicted RBP6.63□□□□□ -1.35
PTCD2-201ENST00000308077 ZUFSPQ96AP4 578 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 RGMAQ96B86 450 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 TM4SF19Q96DZ7 209 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 OR52E6Q96RD3 313 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 SLC38A3Q99624 504 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 SLC6A16Q9GZN6 736 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 REXO4Q9GZR2 422 aaKnown RBP6.63□□□□□ -1.35
PTCD2-201ENST00000308077 MYNNQ9NPC7 610 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 GID8Q9NWU2 228 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 ZSCAN32Q9NX65 697 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 ADA2Q9NZK5 511 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 ANKMY1Q9P2S6 941 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 ABCD2Q9UBJ2 740 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 NKX1-2Q9UD57 310 aaPredicted RBP6.63□□□□□ -1.35
PTCD2-201ENST00000308077 CD300AQ9UGN4 299 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 PCDHA9Q9Y5H5 950 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 PIEZO2Q9H5I5 2752 aa6.63□□□□□ -1.35
PTCD2-201ENST00000308077 ARID1BQ8NFD5 2236 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LOC105369274A0A096LPK9 316 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 A0A0A6YYD5 115 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LOC102723532A0A0G2JNH3 316 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ARHGAP10A1A4S6 786 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CASC3O15234 703 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TMPRSS11DO60235 418 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 FKBP9O95302 570 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CFIP05156 583 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 IL3P08700 152 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LAMP1P11279 417 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CDKN2CP42773 168 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 KIR3DL1P43629 444 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ARRB1P49407 418 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ERFP50548 548 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 GFERP55789 205 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MS4A2Q01362 244 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 FOXM1Q08050 763 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PWP1Q13610 501 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PDE7AQ13946 482 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SIM2Q14190 667 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SELPLGQ14242 412 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LPAL2Q16609 132 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MAPKAPK3Q16644 382 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DPY19L1Q2PZI1 675 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MUM1Q2TAK8 710 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 HLA-BQ31612 363 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TMEM35AQ53FP2 167 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 RABL3Q5HYI8 236 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 WASHC2DQ5SRD0 308 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CCNYL2Q5T2Q4 361 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 OR4C11Q6IEV9 310 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DNAJC14Q6Y2X3 702 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CAMKMTQ7Z624 323 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ASPGQ86U10 573 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ANKRD46Q86W74 232 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 NUDT13Q86X67 352 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 OR4N4Q8N0Y3 316 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TBC1D19Q8N5T2 526 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ARL10Q8N8L6 244 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 KCT2Q8NC54 265 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 OR8J2Q8NGG1 315 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 OR2I1PQ8NGU4 316 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DNAJB14Q8TBM8 379 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 NT5CQ8TCD5 201 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SAP25Q8TEE9 199 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TMEM125Q96AQ2 219 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TM4SF18Q96CE8 201 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TRAPPC9Q96Q05 1148 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CGREF1Q99674 301 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 HOPXQ9BPY8 73 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 C17orf62Q9BQA9 187 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 INPP5KQ9BT40 448 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TMEM121BQ9BXQ6 578 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PAIP1Q9H074 479 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DDX31Q9H8H2 851 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 FAM60AQ9NP50 221 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SPAG4Q9NPE6 437 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PRDM7Q9NQW5 492 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SLC25A37Q9NYZ2 338 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 AHSPQ9NZD4 102 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 VAPAQ9P0L0 249 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LRIT1Q9P2V4 623 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ATP6V1HQ9UI12 483 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ERVK-11Q9UQG0 969 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 POMPQ9Y244 141 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MAN2B2Q9Y2E5 1009 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PCDHGA2Q9Y5H1 932 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 OTOGLQ3ZCN5 2332 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TRBV5-3A0A0A0MS03 114 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LY6G6EA0A0G2JKS1 128 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms