RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PLP2Q04941 152 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ADGRE1Q14246 886 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 METTL21CQ5VZV1 264 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 PARS2Q7L3T8 475 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 LRRC25Q8N386 305 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 OR4K1Q8NGD4 311 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CEP76Q8TAP6 659 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ISG20Q96AZ6 181 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ARRDC3Q96B67 414 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 MARCH7Q9H992 704 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CXXC1Q9P0U4 656 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ATXN10Q9UBB4 475 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 SEC14L5O43304 696 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 EDN1P05305 212 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 TIMP2P16035 220 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 IL1RNP18510 177 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 BMP8BP34820 402 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 PIK3CBP42338 1070 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CRB2Q5IJ48 1285 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 BMP8AQ7Z5Y6 402 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ELSPBP1Q96BH3 223 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ADAD1Q96M93 576 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 F2RL3Q96RI0 385 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 RANBP9Q96S59 729 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 MGME1Q9BQP7 344 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 PELOQ9BRX2 385 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 OR52A4PA6NMU1 304 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 RAB6CQ53S08 254 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 UNC5DQ6UXZ4 953 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 PJA1Q8NG27 643 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 OSBPL11Q9BXB4 747 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 RAB6CQ9H0N0 254 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 REEP4Q9H6H4 257 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 SSU72Q9NP77 194 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 PCDHGB7Q9Y5F8 929 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CASP8AP2Q9UKL3 1982 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 IFNA6P05013 189 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 DBIP07108 87 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 UFM1P61960 85 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CLDN10P78369 228 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 DPPA4Q7L190 304 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ADGRD2Q7Z7M1 963 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 GLIS1Q8NBF1 620 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 OR14L1PQ8NHC6 308 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 A0A0J9YY10 115 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 DLX3O60479 287 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 PDCD4Q53EL6 469 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 TMPPEQ6ZT21 453 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 OR5AR1Q8NGP9 310 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 GEMIN6Q8WXD5 167 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 MOAP1Q96BY2 351 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 BOCQ9BWV1 1114 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 MRPS26Q9BYN8 205 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 TAAR2Q9P1P5 351 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CRNNQ9UBG3 495 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ACAD8Q9UKU7 415 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 ANKRD12Q6UB98 2062 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 FAM25EA8MYX2 175 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 C11orf98E9PRG8 122 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 AQP9O43315 295 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 GGT5P36269 586 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 HSD11B1LQ7Z5J1 315 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 OR4N5Q8IXE1 308 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 NPAS3Q8IXF0 933 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 OR6C4Q8NGE1 309 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 THEM6Q8WUY1 208 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 RADILQ96JH8 1075 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 SLC6A17Q9H1V8 727 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 IRAK3Q9Y616 596 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 A0A0U1RQS6 177 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 MPZL2O60487 215 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 C9P02748 559 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 G6PDP11413 515 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 HLA-FP30511 346 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 DSC3Q14574 896 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM173Q86WV6 379 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF611Q8N823 705 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 WDR60Q8WVS4 1066 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 PMM1Q92871 262 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 FIZ1Q96SL8 496 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 LPAR4Q99677 370 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 USP54Q70EL1 1684 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 HOXD9P28356 352 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 SYT16Q17RD7 645 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF678Q5SXM1 525 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZCCHC7Q8N3Z6 543 aaKnown RBP10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 DHRS1Q96LJ7 313 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 TRAPPC9Q96Q05 1148 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 CIB1Q99828 191 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 NAA11Q9BSU3 229 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 SLAMF7Q9NQ25 335 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 CPNE7Q9UBL6 633 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 GPR37L1O60883 481 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF888P0CJ79 500 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 OR12D1P0DN82 309 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 PRDX6P30041 224 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 458.9 ms