RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PRKNO60260 465 aaPredicted RBP10.95□□□□□ -0.66
SMIM4-201ENST00000307106 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
SMIM4-201ENST00000307106 HCN1O60741 890 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 B3GALT4O96024 378 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 FMO4P31512 558 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 SOX3P41225 446 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 GRIA1P42261 906 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 HADHBP55084 474 aaKnown RBP10.95□□□□□ -0.66
SMIM4-201ENST00000307106 GDF10P55107 478 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 WNT3P56703 355 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 SKP1P63208 163 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 IQCB1Q15051 598 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 HYAL4Q2M3T9 481 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 ZNF750Q32MQ0 723 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 DEFB134Q4QY38 66 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 XKR6Q5GH73 641 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 POMZP3Q6PJE2 187 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 FAM47EQ6ZV65 393 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 MAATS1Q7Z4T9 603 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 ULK2Q8IYT8 1036 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 MPP5Q8N3R9 675 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 FBXW8Q8N3Y1 598 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 ZNF740Q8NDX6 193 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 PPHLN1Q8NEY8 458 aaKnown RBP10.95□□□□□ -0.66
SMIM4-201ENST00000307106 PIGTQ969N2 578 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 KIAA1191Q96A73 305 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 BIRC8Q96P09 236 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 SECISBP2Q96T21 854 aaKnown RBP10.95□□□□□ -0.66
SMIM4-201ENST00000307106 CCDC177Q9NQR7 707 aaPredicted RBP10.95□□□□□ -0.66
SMIM4-201ENST00000307106 SAMD15Q9P1V8 674 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 GALPQ9UBC7 116 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 PCDHGB3Q9Y5G1 929 aa10.95□□□□□ -0.66
SMIM4-201ENST00000307106 ERI2A8K979 691 aaKnown RBP10.94□□□□□ -0.66
SMIM4-201ENST00000307106 NDUFS4O43181 175 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 ZFAND5O76080 213 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 TJP3O95049 919 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 ALOX12P18054 663 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 CHRM3P20309 590 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 IMPA1P29218 277 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 CEACAM8P31997 349 aaPredicted RBP10.94□□□□□ -0.66
SMIM4-201ENST00000307106 PTPN7P35236 360 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 GRK3P35626 688 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 DNASE1L1P49184 302 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 TBPL1P62380 186 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 FOXO1Q12778 655 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 RPS6KA1Q15418 735 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 PODNL1Q6PEZ8 512 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 RTL4Q6ZR62 310 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 REXO1L1PQ8IX06 675 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 OTUD6BQ8N6M0 293 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 MFSD9Q8NBP5 474 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 OR8K1Q8NGG5 319 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 SMPDL3BQ92485 455 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 NCLNQ969V3 563 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 PERPQ96FX8 193 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 PDLIM2Q96JY6 352 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 RASL10BQ96S79 203 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 DNAJC7Q99615 494 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 AARSD1Q9BTE6 412 aaKnown RBP10.94□□□□□ -0.66
SMIM4-201ENST00000307106 NHEJ1Q9H9Q4 299 aaPredicted RBP10.94□□□□□ -0.66
SMIM4-201ENST00000307106 CHRAC1Q9NRG0 131 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 ZNHIT6Q9NWK9 470 aaKnown RBP10.94□□□□□ -0.66
SMIM4-201ENST00000307106 TUBA8Q9NY65 449 aaPredicted RBP10.94□□□□□ -0.66
SMIM4-201ENST00000307106 ZFATQ9P243 1243 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 MYOTQ9UBF9 498 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 SH2B3Q9UQQ2 575 aa10.94□□□□□ -0.66
SMIM4-201ENST00000307106 ABCA1O95477 2261 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 EEF1E1-BLOC1S5C9J1V9 151 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 H3BMM5 538 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 PSMD12O00232 456 aaPredicted RBP10.93□□□□□ -0.66
SMIM4-201ENST00000307106 EEF1E1O43324 174 aaKnown RBP10.93□□□□□ -0.66
SMIM4-201ENST00000307106 CEP104O60308 925 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 EPPINO95925 133 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 IL2RAP01589 272 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
SMIM4-201ENST00000307106 TIMP3P35625 211 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 ZNF136P52737 540 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 TRIM14Q14142 442 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 TERF2Q15554 542 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 HECTD2Q5U5R9 776 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 C11orf63Q6NUN7 778 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 NIPAL1Q6NVV3 410 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 AADACL2Q6P093 401 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 SCYL1Q96KG9 808 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 DACH2Q96NX9 599 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 SEMA4BQ9NPR2 832 aaPredicted RBP10.93□□□□□ -0.66
SMIM4-201ENST00000307106 PNO1Q9NRX1 252 aaKnown RBP10.93□□□□□ -0.66
SMIM4-201ENST00000307106 SACM1LQ9NTJ5 587 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 PPIEQ9UNP9 301 aaKnown RBP10.93□□□□□ -0.66
SMIM4-201ENST00000307106 CRYL1Q9Y2S2 319 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 EXPH5Q8NEV8 1989 aa10.93□□□□□ -0.66
SMIM4-201ENST00000307106 KDM4EB2RXH2 506 aaPredicted RBP10.92□□□□□ -0.66
SMIM4-201ENST00000307106 E5RI56 91 aa10.92□□□□□ -0.66
SMIM4-201ENST00000307106 WWP2O00308 870 aa10.92□□□□□ -0.66
SMIM4-201ENST00000307106 CLDN4O14493 209 aa10.92□□□□□ -0.66
SMIM4-201ENST00000307106 ZBTB14O43829 449 aa10.92□□□□□ -0.66
SMIM4-201ENST00000307106 CNOT4O95628 575 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms