RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 SPNS1Q9H2V7 528 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 LYRM4Q9HD34 91 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 PRDM7Q9NQW5 492 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 FOXJ2Q9P0K8 574 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 DNAJC15Q9Y5T4 150 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 SPACA6W5XKT8 324 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 LAMA5O15230 3695 aa8.4□□□□□ -1.06
VPREB1-201ENST00000302273 COL27A1Q8IZC6 1860 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 A0A087WV48 116 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 TRPC5OSA6NMA1 111 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 P2RX6O15547 441 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 B3GALT2O43825 422 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 NRP2O60462 931 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 TGDSO95455 350 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 TBX6O95947 436 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 PCNAP12004 261 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 HIST1H1TP22492 207 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 JAK1P23458 1154 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 EIF2S3P41091 472 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 BST1Q10588 318 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 SLC9A5Q14940 896 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 NCF4Q15080 339 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 GKAP1Q5VSY0 366 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 OR4C11Q6IEV9 310 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 NUDT13Q86X67 352 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 CACNA2D3Q8IZS8 1091 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 METTL4Q8N3J2 472 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 IL22RA1Q8N6P7 574 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 GALNT6Q8NCL4 622 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 CCDC197Q8NCU1 140 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 PIWIL2Q8TC59 973 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 KCNE4Q8WWG9 221 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 ZNF75CPQ92670 426 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 MR1Q95460 341 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 COL26A1Q96A83 441 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 C11orf24Q96F05 449 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 NSRP1Q9H0G5 558 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 RYDENQ9NUL5 291 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 RIC8BQ9NVN3 520 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 IFT80Q9P2H3 777 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 NDOR1Q9UHB4 597 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 GPN3Q9UHW5 284 aaPredicted RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 MRPS33Q9Y291 106 aaKnown RBP8.39□□□□□ -1.07
VPREB1-201ENST00000302273 IGF2RP11717 2491 aa8.39□□□□□ -1.07
VPREB1-201ENST00000302273 A0A1B0GTL3 188 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 WDR91A4D1P6 747 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 CLDN4O14493 209 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TERTO14746 1132 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 HDAC3O15379 428 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 MYO1DO94832 1006 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 KLHL18O94889 574 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TGFB1P01137 390 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 PDYNP01213 254 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SERPIND1P05546 499 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 ZNF888P0CJ79 500 aaPredicted RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 RNH1P13489 461 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 ZNF28P17035 718 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 DDX5P17844 614 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TSPAN8P19075 237 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TCN2P20062 427 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SPINK2P20155 84 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 BGNP21810 368 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 PTPN4P29074 926 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 PPP2R1BP30154 601 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TLX1P31314 330 aaPredicted RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 NEK2P51955 445 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 RAP1GDS1P52306 607 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 HSD17B7P56937 341 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 RPS13P62277 151 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 BTN3A2P78410 334 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 OCRLQ01968 901 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 MAD2L1Q13257 205 aaPredicted RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SSPNQ14714 243 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 DEFB134Q4QY38 66 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TOR1AIP1Q5JTV8 583 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SH2D4BQ5SQS7 431 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 BROXQ5VW32 411 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 LRRC69Q6ZNQ3 347 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TIPARPQ7Z3E1 657 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 PROSER1Q86XN7 944 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 CRLF3Q8IUI8 442 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 WDR75Q8IWA0 830 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 AMER3Q8N944 861 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 ACOT4Q8N9L9 421 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 OR2Y1Q8NGV0 311 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 MGARPQ8TDB4 240 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 CHTF18Q8WVB6 975 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SNRNP27Q8WVK2 155 aaKnown RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 THAP4Q8WY91 577 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 TBC1D20Q96BZ9 403 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 MOCOSQ96EN8 888 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 MMABQ96EY8 250 aaPredicted RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SLC45A3Q96JT2 553 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 PPP3R2Q96LZ3 170 aa8.38□□□□□ -1.07
VPREB1-201ENST00000302273 CCNL2Q96S94 520 aaPredicted RBP8.38□□□□□ -1.07
VPREB1-201ENST00000302273 SORT1Q99523 831 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms