RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ACADMP11310 421 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 LHCGRP22888 699 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ADRA1AP35348 466 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 CAPZA2P47755 286 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 CLDN8P56748 225 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 TIMM50Q3ZCQ8 353 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 RNF130Q86XS8 419 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 IQCF1Q8N6M8 205 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 SLC22A8Q8TCC7 542 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 TSPEARQ8WU66 669 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 SKA2Q8WVK7 121 aaPredicted RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 SIGLEC11Q96RL6 698 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ZNF416Q9BWM5 594 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ZNF408Q9H9D4 720 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 STOML2Q9UJZ1 356 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 SAMD4AQ9UPU9 718 aaKnown RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 C2orf78A6NCI8 922 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 DVL2O14641 736 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SEPT4O43236 478 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SSNA1O43805 119 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 KDELR2P33947 212 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GGT2P36268 569 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 RBBP4Q09028 425 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 LRRC74AQ0VAA2 488 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SEMA3BQ13214 749 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SPHARQ15513 63 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 LGALSLQ3ZCW2 172 aaPredicted RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 SV2CQ496J9 727 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GLYR1Q49A26 553 aaPredicted RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 ZRANB3Q5FWF4 1079 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 MZT2BQ6NZ67 158 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 HMGN2P46Q86SG4 172 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 ZFP82Q8N141 532 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 FTMTQ8N4E7 242 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SRFBP1Q8NEF9 429 aaKnown RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 OR4K2Q8NGD2 314 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 KIAA1191Q96A73 305 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 APOLD1Q96LR9 279 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 C12orf66Q96MD2 445 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 COQ10AQ96MF6 247 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 CD244Q9BZW8 370 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 PCDHB16Q9NRJ7 776 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 RBFOX1Q9NWB1 397 aaKnown RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 HPF1Q9NWY4 346 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 PAPPA2Q9BXP8 1791 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 RAB19A4D1S5 217 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 CHP2O43745 196 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 ATG12O94817 140 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 EGFP01133 1207 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 RPS17P08708 135 aaKnown RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 OLR1P78380 273 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.195e-8■□□□□ 11.1
CDT1-201ENST00000301019 ZNF273Q14593 569 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 PTGES3Q15185 160 aaKnown RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 KLHL22Q53GT1 634 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SFRP5Q5T4F7 317 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 MRNIPQ6NTE8 343 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 ZZZ3Q8IYH5 903 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 CREB3L4Q8TEY5 395 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GATAD2BQ8WXI9 593 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 SDHAF2Q9NX18 166 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 OTOFQ9HC10 1997 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 RPS10-NUDT3A0A1W2PQS6 291 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 FAM74A7A6NL05 159 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 CLIC1O00299 241 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SLC30A4O14863 429 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GPR182O15218 404 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 HBQ1P09105 142 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 FAM74A3Q4VXF1 159 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 TMEM132CQ8N3T6 1108 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 REPS2Q8NFH8 660 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GPR152Q8TDT2 470 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GTF3C2Q8WUA4 911 aaPredicted RBP13.85□□□□□ -0.19
CDT1-201ENST00000301019 WNT2BQ93097 391 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 GIMAP5Q96F15 307 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 TMED9Q9BVK6 235 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 SLC29A3Q9BZD2 475 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 IFT22Q9H7X7 185 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 ACAD9Q9H845 621 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 PDGFCQ9NRA1 345 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 A3GALT2U3KPV4 340 aa13.85□□□□□ -0.19
CDT1-201ENST00000301019 PAGE1O75459 146 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 CCNB2O95067 398 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 BCKDHAP12694 445 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 DNASE1P24855 282 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 HLA-DMAP28067 261 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 OC90Q02509 493 aaPredicted RBP13.84□□□□□ -0.19
CDT1-201ENST00000301019 DSC1Q08554 894 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 ATAT1Q5SQI0 421 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 XKRXQ6PP77 449 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 PIANPQ8IYJ0 282 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 OR7D4Q8NG98 312 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 OR2T35Q8NGX2 323 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms