RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SLC5A11Q8WWX8 675 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 HDAC2Q92769 488 aaKnown RBP21.02■□□□□ 0.96
TPM4-201ENST00000300933 OSGEPL1Q9H4B0 414 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 EHD1Q9H4M9 534 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 CCDC177Q9NQR7 707 aaPredicted RBP21.02■□□□□ 0.96
TPM4-201ENST00000300933 PAK1IP1Q9NWT1 392 aaPredicted RBP21.02■□□□□ 0.96
TPM4-201ENST00000300933 RAPGEFL1Q9UHV5 662 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 RTCAO00442 366 aaKnown RBP21.01■□□□□ 0.95
TPM4-201ENST00000300933 NDUFS2O75306 463 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PRSS23O95084 383 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 STATHP02808 62 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 MAT2AP31153 395 aaKnown RBP21.01■□□□□ 0.95
TPM4-201ENST00000300933 IL1RL1Q01638 556 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 KIAA1211LQ6NV74 962 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PTOV1Q86YD1 416 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 FAM9CQ8IZT9 166 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 CPA6Q8N4T0 437 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 Q8N9G6 341 aaPredicted RBP21.01■□□□□ 0.95
TPM4-201ENST00000300933 MUL1Q969V5 352 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PYURFQ96I23 114 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 SGPP1Q9BX95 441 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 ACSL6Q9UKU0 697 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PLEKHM1Q9Y4G2 1056 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 FEZF1A0PJY2 475 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 SERTM1A2A2V5 107 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 NPIPB8E9PQR5 432 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 XPNPEP2O43895 674 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 TIA1P31483 386 aaKnown RBP eCLIP21.01■□□□□ 0.951e-15■■■■□ 23.7
TPM4-201ENST00000300933 CST6Q15828 149 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PRSS53Q2L4Q9 553 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 AGBL4Q5VU57 503 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PPP2R2DQ66LE6 453 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 GALNT5Q7Z7M9 940 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 OR8J2Q8NGG1 315 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 OR5AK3PQ8NH89 298 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 TPD52L3Q96J77 140 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 NODALQ96S42 347 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 BRF2Q9HAW0 419 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 FZD3Q9NPG1 666 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 CUEDC1Q9NWM3 386 aaPredicted RBP21.01■□□□□ 0.95
TPM4-201ENST00000300933 TAC3Q9UHF0 121 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 MOSPD1Q9UJG1 213 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 MYO1GB0I1T2 1018 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 HS6ST1O60243 411 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 RETP07949 1114 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 TCEA1P23193 301 aaKnown RBP21.01■□□□□ 0.95
TPM4-201ENST00000300933 FGL2Q14314 439 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 ADPRMQ3LIE5 342 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 NXPE4Q6UWF7 544 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PLEKHG7Q6ZR37 379 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 ZNF765Q7L2R6 523 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 PLD3Q8IV08 490 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 ZDHHC21Q8IVQ6 265 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 ZZZ3Q8IYH5 903 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 ZNF555Q8NEP9 628 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 MBOAT4Q96T53 435 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 DMRT3Q9NQL9 472 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 SPASTQ9UBP0 616 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 FZD4Q9ULV1 537 aa21.01■□□□□ 0.95
TPM4-201ENST00000300933 MITFO75030 526 aaPredicted RBP21■□□□□ 0.95
TPM4-201ENST00000300933 ALOX5P09917 674 aa21■□□□□ 0.95
TPM4-201ENST00000300933 CLCNKAP51800 687 aa21■□□□□ 0.95
TPM4-201ENST00000300933 TAS2R50P59544 299 aa21■□□□□ 0.95
TPM4-201ENST00000300933 SLC13A2Q13183 592 aa21■□□□□ 0.95
TPM4-201ENST00000300933 KCNAB2Q13303 367 aa21■□□□□ 0.95
TPM4-201ENST00000300933 ADCK1Q86TW2 530 aa21■□□□□ 0.95
TPM4-201ENST00000300933 HTRA1Q92743 480 aa21■□□□□ 0.95
TPM4-201ENST00000300933 AASSQ9UDR5 926 aa21■□□□□ 0.95
TPM4-201ENST00000300933 KIAA1549LQ6ZVL6 1849 aa21■□□□□ 0.95
TPM4-201ENST00000300933 PLXND1Q9Y4D7 1925 aa21■□□□□ 0.95
TPM4-201ENST00000300933 SPEGQ15772 3267 aa21■□□□□ 0.95
TPM4-201ENST00000300933 PRAMEF33A0A0G2JMD5 474 aa21■□□□□ 0.95
TPM4-201ENST00000300933 FKBP9O95302 570 aa21■□□□□ 0.95
TPM4-201ENST00000300933 ACP5P13686 325 aa21■□□□□ 0.95
TPM4-201ENST00000300933 ACPPP15309 386 aa21■□□□□ 0.95
TPM4-201ENST00000300933 DCTP40126 519 aa21■□□□□ 0.95
TPM4-201ENST00000300933 TRPC1P48995 793 aa21■□□□□ 0.95
TPM4-201ENST00000300933 FCHO2Q0JRZ9 810 aa21■□□□□ 0.95
TPM4-201ENST00000300933 DGCR6Q14129 220 aa21■□□□□ 0.95
TPM4-201ENST00000300933 VMACQ2NL98 169 aa21■□□□□ 0.95
TPM4-201ENST00000300933 COX20Q5RI15 118 aa21■□□□□ 0.95
TPM4-201ENST00000300933 TTC23Q5W5X9 447 aa21■□□□□ 0.95
TPM4-201ENST00000300933 LAIR2Q6ISS4 152 aa21■□□□□ 0.95
TPM4-201ENST00000300933 FKBP9P1Q75LS8 142 aa21■□□□□ 0.95
TPM4-201ENST00000300933 NAGSQ8N159 534 aa21■□□□□ 0.95
TPM4-201ENST00000300933 OR4A15Q8NGL6 344 aa21■□□□□ 0.95
TPM4-201ENST00000300933 MAGEB10Q96LZ2 347 aaPredicted RBP21■□□□□ 0.95
TPM4-201ENST00000300933 TPK1Q9H3S4 243 aa21■□□□□ 0.95
TPM4-201ENST00000300933 SCHIP1Q9P0W5 487 aaPredicted RBP21■□□□□ 0.95
TPM4-201ENST00000300933 GPR34Q9UPC5 381 aa21■□□□□ 0.95
TPM4-201ENST00000300933 MUC22E2RYF6 1773 aaPredicted RBP20.99■□□□□ 0.95
TPM4-201ENST00000300933 KLHL18O94889 574 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 POU2F2P09086 479 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 HBA1P69905 142 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 PRAMEF14Q5SWL7 426 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 PRAMEF13Q5VWM6 474 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 COX14Q96I36 57 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 HDAC8Q9BY41 377 aa20.99■□□□□ 0.95
TPM4-201ENST00000300933 MKRN2Q9H000 416 aaKnown RBP20.99■□□□□ 0.95
TPM4-201ENST00000300933 XKR8Q9H6D3 395 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms