RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 IL3P08700 152 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 PPIBP23284 216 aaKnown RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 RNF144AP50876 292 aaPredicted RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 CD83Q01151 205 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 GPAT3Q53EU6 434 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 ZC3H12BQ5HYM0 836 aaKnown RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 ZNF57Q68EA5 555 aaPredicted RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 KDM4DQ6B0I6 523 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 CBLL1Q75N03 491 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 COMMD6Q7Z4G1 85 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 DNAJB8Q8NHS0 232 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 WDR37Q9Y2I8 494 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 SPIN1Q9Y657 262 aaPredicted RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 FAM25AB3EWG3 89 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 FAM25CB3EWG5 89 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 FAM25GB3EWG6 89 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 TGM4P49221 684 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 UGT2B15P54855 530 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 TBPL1P62380 186 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 OLR1P78380 273 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 TJAP1Q5JTD0 557 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 DOK4Q8TEW6 326 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 KLK6Q92876 244 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 CITED4Q96RK1 184 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 TTYH2Q9BSA4 534 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 TBC1D17Q9HA65 648 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 CACYBPQ9HB71 228 aaKnown RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 STOX2Q9P2F5 926 aaPredicted RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 IL20RAQ9UHF4 553 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 SSR3Q9UNL2 185 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 PEX16Q9Y5Y5 336 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 PDCD11Q14690 1871 aaKnown RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 ATG2BQ96BY7 2078 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 GSAPA4D1B5 854 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 GRXCR2A6NFK2 248 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 LEFTY2O00292 366 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 CDRT1O95170 752 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 RPS3P23396 243 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 NRIP1P48552 1158 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 KIAA0040Q15053 153 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 SERPINA11Q86U17 422 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 ATP6V1HQ9UI12 483 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 CORO2BQ9UQ03 480 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 POFUT2Q9Y2G5 429 aa16.68■□□□□ 0.26
CHRNA5-201ENST00000299565 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 NME6O75414 186 aaPredicted RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 ZDHHC11BP0C7U3 371 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 TYRP14679 529 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 RPS7P62081 194 aaKnown RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 GRIN2CQ14957 1233 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 PTGES3Q15185 160 aaKnown RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 PARP16Q8N5Y8 322 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 C19orf18Q8NEA5 215 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 FNDC11Q9BVV2 318 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 DUSP21Q9H596 190 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 CCL26Q9Y258 94 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 MRPS7Q9Y2R9 242 aaKnown RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 HCN4Q9Y3Q4 1203 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 CCL27Q9Y4X3 112 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 SAGE2PA6NJ88 616 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 TRIM64CA6NLI5 447 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 SOCS5O75159 536 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 UPK1BO75841 260 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 MRPL58Q14197 206 aaKnown RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 LAIR2Q6ISS4 152 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 REPS1Q96D71 796 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 TRMT61BQ9BVS5 477 aaKnown RBP16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 KCNK12Q9HB15 430 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 NEK6Q9HC98 313 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 TMEM184CQ9NVA4 438 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 PCDHGA6Q9Y5G7 932 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 PLXNB2O15031 1838 aa16.67■□□□□ 0.26
CHRNA5-201ENST00000299565 PSIP1O75475 530 aaKnown RBP16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 JRKO75564 520 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 C8orf89P0DMQ9 161 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 B4GALNT1Q00973 533 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 FNDC3BQ53EP0 1204 aaKnown RBP16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 GHDCQ8N2G8 530 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 MACROD1Q9BQ69 325 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 H2AFY2Q9P0M6 372 aaPredicted RBP16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 IFT52Q9Y366 437 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 ALPK2Q86TB3 2170 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 TLR4O00206 839 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 CBSLP0DN79 551 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 TIA1P31483 386 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 CBSP35520 551 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 DSTNP60981 165 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 SELENOWP63302 87 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 ZNF763Q0D2J5 394 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 KEAP1Q14145 624 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 LSRQ86X29 649 aaPredicted RBP16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 PTOV1Q86YD1 416 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 CYP4Z2PQ8N1L4 340 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 DYNC2LI1Q8TCX1 351 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 PHF21AQ96BD5 680 aa16.66■□□□□ 0.26
CHRNA5-201ENST00000299565 TMEM39AQ9NV64 488 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms