RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
TTC39B-201ENST00000297615 CELF5Q8N6W0 485 aaKnown RBP12.97□□□□□ -0.33
TTC39B-201ENST00000297615 OR9Q2Q8NGE9 314 aa12.97□□□□□ -0.33
TTC39B-201ENST00000297615 COX4I2Q96KJ9 171 aa12.97□□□□□ -0.33
TTC39B-201ENST00000297615 LYSMD1Q96S90 227 aa12.97□□□□□ -0.33
TTC39B-201ENST00000297615 AGAP14A8MT82 685 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 SOX14O95416 240 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 ADH1CP00326 375 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 KRT20P35900 424 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.33
TTC39B-201ENST00000297615 SPIBQ01892 262 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 VITQ6UXI7 678 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 YAF2Q8IY57 180 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 FGF14Q92915 247 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 C12orf66Q96MD2 445 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 FEVQ99581 238 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 SMAD5Q99717 465 aaKnown RBP12.96□□□□□ -0.33
TTC39B-201ENST00000297615 SLC35A5Q9BS91 424 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 QRSL1Q9H0R6 528 aaKnown RBP12.96□□□□□ -0.33
TTC39B-201ENST00000297615 KCNK12Q9HB15 430 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 IL1RAPQ9NPH3 570 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 ABCB10Q9NRK6 738 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 TRPC4Q9UBN4 977 aa12.96□□□□□ -0.33
TTC39B-201ENST00000297615 EPOPA6NHQ4 379 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 PCDHGA12O60330 932 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 AK4P27144 223 aaPredicted RBP12.96□□□□□ -0.34
TTC39B-201ENST00000297615 GBX1Q14549 363 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 SHHQ15465 462 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 INAQ16352 499 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 SLC5A12Q1EHB4 618 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 LEXMQ3ZCV2 418 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 SPDYE7PQ495Y7 208 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 PRAMEF14Q5SWL7 426 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 PLEKHS1Q5SXH7 462 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 GTF2IRD2BQ6EKJ0 949 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 PARM1Q6UWI2 310 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.34
TTC39B-201ENST00000297615 GTF2IRD2Q86UP8 949 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 P2RY8Q86VZ1 359 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 RBM45Q8IUH3 476 aaKnown RBP12.96□□□□□ -0.34
TTC39B-201ENST00000297615 DEFB119Q8N690 84 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 OR5D16Q8NGK9 328 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 DTD2Q96FN9 168 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 C17orf62Q9BQA9 187 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 RHBGQ9H310 441 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 RDH14Q9HBH5 336 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 RAD18Q9NS91 495 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.34
TTC39B-201ENST00000297615 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 PIPSLA2A3N6 862 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CD36P16671 472 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 PSMA3P25788 255 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 RXRGP48443 463 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 GZMMP51124 257 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 DMC1Q14565 340 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 Q6ZNX1 250 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 TMEM145Q8NBT3 493 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CCL4L1Q8NHW4 92 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 HTRA1Q92743 480 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 MKRN2Q9H000 416 aaKnown RBP12.95□□□□□ -0.34
TTC39B-201ENST00000297615 ZBTB20Q9HC78 741 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 EXO1Q9UQ84 846 aaKnown RBP12.95□□□□□ -0.34
TTC39B-201ENST00000297615 TRIM64A6NGJ6 449 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 RGS10O43665 173 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 HPRP00739 348 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 HOXC5Q00444 222 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 ID2Q02363 134 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 WSCD2Q2TBF2 565 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 PRSS36Q5K4E3 855 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 SLCO4C1Q6ZQN7 724 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CALHM3Q86XJ0 350 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CCDC71Q8IV32 467 aaPredicted RBP12.95□□□□□ -0.34
TTC39B-201ENST00000297615 XAGE5Q8WWM1 108 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 PPCDCQ96CD2 204 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 APOL4Q9BPW4 351 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 CFHR5Q9BXR6 569 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 YTHDF1Q9BYJ9 559 aaKnown RBP12.95□□□□□ -0.34
TTC39B-201ENST00000297615 SACM1LQ9NTJ5 587 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 FAIMQ9NVQ4 179 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 ZNF229Q9UJW7 825 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 FBXW2Q9UKT8 454 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 RBMX2Q9Y388 322 aaKnown RBP12.95□□□□□ -0.34
TTC39B-201ENST00000297615 TPRKBQ9Y3C4 175 aa12.95□□□□□ -0.34
TTC39B-201ENST00000297615 IGLV3-16A0A075B6K0 115 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SLC5A10A0PJK1 596 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 FUOMA2VDF0 154 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 NPC1O15118 1278 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 LCMT2O60294 686 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 KAT7O95251 611 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 GSTM1P09488 218 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DNAJA1P31689 397 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ST13P50502 369 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 GSTM4Q03013 218 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DLX2Q07687 328 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms