RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 BEND4Q6ZU67 534 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ZNF767PQ75MW2 155 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 BMP8AQ7Z5Y6 402 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 NAXEQ8NCW5 288 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RPLP0P6Q8NHW5 317 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 BRI3BPQ8WY22 251 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RIT1Q92963 219 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 PCED1BQ96HM7 432 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TMEM68Q96MH6 324 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 FCRL5Q96RD9 977 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 CD180Q99467 661 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 OR2AG1Q9H205 316 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RNF121Q9H920 327 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RBPJLQ9UBG7 517 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 SPO11Q9Y5K1 396 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RREB1Q92766 1687 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 IGLV3-22A0A075B6J6 115 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TCRBV7S3A2A0A539 114 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TMEM150CB9EJG8 249 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 SLC31A1O15431 190 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 MT-ND5P03915 603 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 CELP19835 753 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 S100PP25815 95 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ENPP2Q13822 863 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 COL28A1Q2UY09 1125 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 DUS1LQ6P1R4 473 aaKnown RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 BPHLQ86WA6 291 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 CPNE8Q86YQ8 564 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 REM2Q8IYK8 340 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 FAM46DQ8NEK8 389 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 SLC22A17Q8WUG5 538 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TCEAL3Q969E4 200 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 RAD9AQ99638 391 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 MCCC2Q9HCC0 563 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TAS2R9Q9NYW1 312 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 MAST2Q6P0Q8 1798 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TEX13CA0A0J9YWL9 993 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 SFTPBP07988 381 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 HTR1AP08908 422 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 MAPK3P27361 379 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 NFE2L1Q14494 772 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 LRRC66Q68CR7 880 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 CEACAM20Q6UY09 585 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 UBQLNLQ8IYU4 475 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 NRSN1Q8IZ57 195 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.39□□□□□ -0.751e-8■■■■■ 47.8
PKNOX1-201ENST00000291547 SIMC1Q8NDZ2 872 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 MUS81Q96NY9 551 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 PSKH2Q96QS6 385 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 OR51I1Q9H343 314 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 HCN4Q9Y3Q4 1203 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 MSCO60682 206 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ARHGEF15O94989 841 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 KLK1P06870 262 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 F7P08709 466 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 HSD3B1P14060 373 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TAS2R43P59537 309 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 PTGR1Q14914 329 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 FXNQ16595 210 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 AGAP7PQ5VUJ5 663 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 COMTD1Q86VU5 262 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 NATD1Q8N6N6 113 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ANGPTL6Q8NI99 470 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 SYT4Q9H2B2 425 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 SERINC1Q9NRX5 453 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 A0A1B0GVT2 93 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 SMIM35A0A1B0GVV1 85 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 YJEFN3A6XGL0 299 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 GPR25O00155 361 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 NFATC1O95644 943 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 AGR2O95994 175 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 PET100P0DJ07 73 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 EIF1AXP47813 144 aaKnown RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 LUMP51884 338 aaPredicted RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 LRRC73Q5JTD7 316 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 EPGNQ6UW88 154 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 CCBE1Q6UXH8 406 aaPredicted RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 AMZ2Q86W34 360 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 TICAM1Q8IUC6 712 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 OR7G2Q8NG99 324 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 SMARCD2Q92925 531 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 SLC32A1Q9H598 525 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 SRRDQ9UH36 339 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 MYBPHLA2RUH7 354 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 EEF1E1O43324 174 aaKnown RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 JUNP05412 331 aaKnown RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 FAM163BP0C2L3 166 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 CCR8P51685 355 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 ST3GAL4Q11206 333 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 LRRC32Q14392 662 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 RAB39AQ14964 217 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 SPANXN4Q5MJ08 99 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 IFNL1Q8IU54 200 aa10.38□□□□□ -0.75
PKNOX1-201ENST00000291547 OR8K3Q8NH51 312 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms