RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 BMP1P13497 986 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CCR7P32248 378 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 GBX1Q14549 363 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 LYPLAL1Q5VWZ2 237 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CHPFQ8IZ52 775 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 GPR26Q8NDV2 337 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 POP5Q969H6 163 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 ZDHHC3Q9NYG2 299 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CLEC4AQ9UMR7 237 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 PTNP21246 168 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CD72P21854 359 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 PPIBP23284 216 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 GGT2P36268 569 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 SRP54P61011 504 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 SNRPD1P62314 119 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 GPR17Q13304 367 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 DOC2AQ14183 400 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 THOC6Q86W42 341 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 ZFP41Q8N8Y5 198 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 ASZ1Q8WWH4 475 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 PSD2Q9BQI7 771 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 NTMT1Q9BV86 223 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CCDC177Q9NQR7 707 aaPredicted RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 FAM120CQ9NX05 1096 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 E7EQ34 232 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 TLX2O43763 284 aaPredicted RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 EFCAB14O75071 495 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 WBP4O75554 376 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 AMD1P17707 334 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 ITGA1P56199 1179 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CNTN1Q12860 1018 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 HSPB3Q12988 150 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 XAGE5Q8WWM1 108 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 TXNDC15Q96J42 360 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 P2RY13Q9BPV8 354 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 TRIM45Q9H8W5 580 aaPredicted RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 PDFQ9HBH1 243 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 ANKHQ9HCJ1 492 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 A0A0G2JN53 185 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 TLR4O00206 839 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 MC1RQ01726 317 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 UGT8Q16880 541 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 C22orf42Q6IC83 251 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 LRRC70Q7Z2Q7 622 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 SLC46A3Q7Z3Q1 461 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 SERPINA11Q86U17 422 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CELF5Q8N6W0 485 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 LILRB4Q8NHJ6 448 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CDADC1Q9BWV3 514 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 OR2B2Q9GZK3 357 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 POLR2J3Q9H1A7 115 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 SEMA3GQ9NS98 782 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 PSORS1C1Q9UIG5 152 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 MRPS7Q9Y2R9 242 aaKnown RBP12.88□□□□□ -0.35
SCAF4-201ENST00000286835 YIPF1Q9Y548 306 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 SLC35F4A4IF30 521 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 AREL1O15033 823 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 PIK3CBP42338 1070 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ASMTP46597 345 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 GPRC6AQ5T6X5 926 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF683Q8IZ20 524 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 HOXD1Q9GZZ0 328 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ENOPH1Q9UHY7 261 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 OSGIN1Q9UJX0 560 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 LCTP09848 1927 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ANKRD34BA5PLL1 514 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ADAM12O43184 909 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 KLK1P06870 262 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 C8GP07360 202 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 MANFP55145 182 aaKnown RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 PTGES3Q15185 160 aaKnown RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 RGNQ15493 299 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 TBCEQ15813 527 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 DCST1Q5T197 706 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ADNP2Q6IQ32 1131 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 VASH1Q7L8A9 365 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 CADM2Q8N3J6 435 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 PLSCR3Q9NRY6 295 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 A0A1W2PQ09 198 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 KMOO15229 486 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms