RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 KRT6BP04259 564 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 KRT6CP48668 564 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 DOK6Q6PKX4 331 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 LRRC70Q7Z2Q7 622 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 SELENOMQ8WWX9 145 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 PPP1R16AQ96I34 528 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 CDCA3Q99618 268 aaPredicted RBP17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 POU2F3Q9UKI9 436 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 MN1Q10571 1320 aaPredicted RBP17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 TRIOO75962 3097 aa17.58■□□□□ 0.4
PDLIM3-201ENST00000284767 KCNE1BA0A087WTH5 132 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 EVPLLA8MZ36 301 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 E9PQ18 207 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 AIREO43918 545 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 LILRB5O75023 590 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 PSIP1O75475 530 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC16A8O95907 504 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 LAMP2P13473 410 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 CD22P20273 847 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 DRD3P35462 400 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 SP140Q13342 867 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 NAE1Q13564 534 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 NUMA1Q14980 2115 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 FAHD1Q6P587 224 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 USP43Q70EL4 1123 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 AHSA2Q719I0 299 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 NLRP8Q86W28 1048 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 HTRA1Q92743 480 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 AASDHPPTQ9NRN7 309 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 DNAJC11Q9NVH1 559 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 STON1Q9Y6Q2 735 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 SNPHO15079 494 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 ZNF8P17098 575 aaPredicted RBP17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 TGFBR1P36897 503 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 HNMTP50135 292 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 ZNF45Q02386 682 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 CHIT1Q13231 466 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 PIP5KL1Q5T9C9 394 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 STEAP3Q658P3 488 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 ADNP2Q6IQ32 1131 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 RASGRP3Q8IV61 690 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 POC5Q8NA72 575 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 ATG16L2Q8NAA4 619 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 NXF2Q9GZY0 626 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 ZBTB20Q9HC78 741 aaPredicted RBP17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 DLGAP4Q9Y2H0 992 aa17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 SAMHD1Q9Y3Z3 626 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-201ENST00000284767 TRPM6Q9BX84 2022 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 E7EQ34 232 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC16A5O15375 505 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ASNA1O43681 348 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 CDKN2CP42773 168 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 NPRL3Q12980 569 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ATAT1Q5SQI0 421 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 PNCKQ6P2M8 343 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ERICH5Q6P6B1 374 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 AGTRAPQ6RW13 159 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ZNF551Q7Z340 670 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ANKRD46Q86W74 232 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 CCDC71Q8IV32 467 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 CXorf40AQ8TE69 158 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 CHAC2Q8WUX2 184 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 PKP4Q99569 1192 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ELOVL6Q9H5J4 265 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 RASSF1Q9NS23 344 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 IGLON5A6NGN9 336 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 H3BM21 787 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 hCG_2039718K7EN88 272 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 RFXANKO14593 260 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 NPC1O15118 1278 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 TBX1O43435 398 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 SH3BGRLO75368 114 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 MAPK1P28482 360 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 TIE1P35590 1138 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 LIPAP38571 399 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 AP1S2P56377 157 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 TAS2R38P59533 333 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 RPP38P78345 283 aaKnown RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 KRR1Q13601 381 aaKnown RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 NFE2L1Q14494 772 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 TBCEQ15813 527 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 ZNF658BQ4V348 819 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 COLEC12Q5KU26 742 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 CDKL4Q5MAI5 379 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 TCAIMQ8N3R3 496 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 AMER2Q8N7J2 671 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 APH1BQ8WW43 257 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 OR4K3Q96R72 315 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 NRTNQ99748 197 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 LGR4Q9BXB1 951 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 HOXD1Q9GZZ0 328 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 EHD1Q9H4M9 534 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 REEP1Q9H902 201 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 RNF6Q9Y252 685 aa17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 RBMX2Q9Y388 322 aaKnown RBP17.56■□□□□ 0.4
PDLIM3-201ENST00000284767 C1QTNF3-AMACRE9PGA6 284 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PCDHGA12O60330 932 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 DPM1O60762 260 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms