RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CATP04040 527 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ANXA8P13928 327 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 HLA-FP30511 346 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 VIPR1P32241 457 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 RPL3P39023 403 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CTSOP43234 321 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 STK19P49842 368 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 RPS3AP61247 264 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 NHLH1Q02575 133 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 FZD5Q13467 585 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 DMC1Q14565 340 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 LAPTM4AQ15012 233 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 INAQ16352 499 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 FBXO43Q4G163 708 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 AGTRAPQ6RW13 159 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 GDPD4Q6W3E5 623 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CCDC81Q6ZN84 652 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 RFLNAQ6ZTI6 216 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CCDC71Q8IV32 467 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ENTHD1Q8IYW4 607 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CLECL1Q8IZS7 167 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 OR56A3Q8NH54 315 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 RHOXF1Q8NHV9 184 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 APH1BQ8WW43 257 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 IRF7Q92985 503 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 SH3KBP1Q96B97 665 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ZSCAN5AQ9BUG6 496 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 MMP27Q9H306 513 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ZDHHC6Q9H6R6 413 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 TRNAU1APQ9NX07 287 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ATP6V1HQ9UI12 483 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 MBD1Q9UIS9 605 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 NDRG2Q9UN36 371 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 DOLKQ9UPQ8 538 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 SIT1Q9Y3P8 196 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PCDHGA6Q9Y5G7 932 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ARHGEF33A8MVX0 844 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ANXA4P09525 319 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CD36P16671 472 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ITGA2P17301 1181 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 IDSP22304 550 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 TGM1P22735 817 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 GGT2P36268 569 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CCR3P51677 355 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PPP5CP53041 499 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 VBP1P61758 197 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PAGE2BQ5JRK9 111 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 SERPINA13PQ6UXR4 307 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PLD3Q8IV08 490 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 DEPDC4Q8N2C3 294 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 CELF5Q8N6W0 485 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 FBXO15Q8NCQ5 510 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 DNASE1L2Q92874 299 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 TMEM159Q96B96 161 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ZHX1-C8orf76Q96EF9 292 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 TPD52L3Q96J77 140 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 MTERF1Q99551 399 aaKnown RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 SGK2Q9HBY8 427 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PCDH12Q9NPG4 1184 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 FKBP14Q9NWM8 211 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 STOX2Q9P2F5 926 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-201ENST00000277198 ENOPH1Q9UHY7 261 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PSORS1C1Q9UIG5 152 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 WNT6Q9Y6F9 365 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
C9orf3-201ENST00000277198 MGAT4DA6NG13 374 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 SAGE2PA6NJ88 616 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TTC34A8MYJ7 566 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 EFCAB9A8MZ26 197 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 E7EQ34 232 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TAF4O00268 1085 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 LEFTY2O00292 366 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 YY2O15391 372 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DIRAS1O95057 198 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 BMP4P12644 408 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 POLR2EP19388 210 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 EPHA2P29317 976 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 WEE1P30291 646 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TIA1P31483 386 aaKnown RBP eCLIP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TGFBR2P37173 567 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 CRYBA2P53672 197 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 RAE1P78406 368 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 SEMG2Q02383 582 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DGCR6Q14129 220 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF77Q15935 545 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 CCDC80Q76M96 950 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 FAM124AQ86V42 546 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 NAT16Q8N8M0 369 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DTWD2Q8NBA8 298 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 VPS35Q96QK1 796 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DPH2Q9BQC3 489 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms