RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PRAMEF4O60810 478 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 CCDC175P0C221 793 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 SLC35G6P0C7Q6 338 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 IGFBP2P18065 325 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PGAM1P18669 254 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 CCR8P51685 355 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 ITGA8P53708 1063 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 RAB8AP61006 207 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 RELBQ01201 579 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 RBPJQ06330 500 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 TFF3Q07654 80 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PWP1Q13610 501 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 ZNF460Q14592 562 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
TPM3-201ENST00000271850 HERC3Q15034 1050 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 KRTCAP3Q53RY4 240 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 CMPK2Q5EBM0 449 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 EMC4Q5J8M3 183 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 TEDDM1Q5T9Z0 273 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 HECTD2Q5U5R9 776 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PRAMEF9Q5VWM5 478 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 DUPD1Q68J44 220 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 ADNP2Q6IQ32 1131 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 MTFR2Q6P444 385 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 C16orf47Q6ZP98 133 aaPredicted RBP8.36□□□□□ -1.07
TPM3-201ENST00000271850 MDGA2Q7Z553 956 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 LRRC8AQ8IWT6 810 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 SCUBE1Q8IWY4 988 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 CA13Q8N1Q1 262 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 SLC5A8Q8N695 610 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 CALML6Q8TD86 181 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 SLC5A11Q8WWX8 675 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 MAGED4Q96JG8 741 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PTCHD1Q96NR3 888 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PCBD2Q9H0N5 130 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 DEPPQ9NTK1 212 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 ZFP69BQ9UJL9 534 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PPP2R2CQ9Y2T4 447 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 PSAT1Q9Y617 370 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 A0A0G2JMM0 328 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 A0A1W2PPB8 328 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 A0A1W2PRS3 328 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 A8MUA0 341 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 KIR3DP1A8MWS1 328 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 CDC7O00311 574 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 DNALI1O14645 258 aaPredicted RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 WISP3O95389 354 aaPredicted RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 GUCA1CO95843 209 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 ZNF24P17028 368 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 IL10P22301 178 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 CCND1P24385 295 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 HNRNPH1P31943 449 aaKnown RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 HNF4AP41235 474 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 MEOX1P50221 254 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 HLCSP50747 726 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 OC90Q02509 493 aaPredicted RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 RUNX2Q13950 521 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 MAPKAPK3Q16644 382 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 HP1BP3Q5SSJ5 553 aaPredicted RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 GALNT7Q86SF2 657 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 SULF2Q8IWU5 870 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 MYO1HQ8N1T3 1032 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 GHDCQ8N2G8 530 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 TMEM178AQ8NBL3 297 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 OR52N2Q8NGI0 321 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 PHF10Q8WUB8 498 aaKnown RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 ANKRD49Q8WVL7 239 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 C14orf79Q96F83 325 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 CERS2Q96G23 380 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 CSF3RQ99062 836 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 HAUS8Q9BT25 410 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 MCMBPQ9BTE3 642 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 ARL15Q9NXU5 204 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 TAS2R13Q9NYV9 303 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 ZFATQ9P243 1243 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 PPIEQ9UNP9 301 aaKnown RBP8.35□□□□□ -1.07
TPM3-201ENST00000271850 HCFC1P51610 2035 aa8.35□□□□□ -1.07
TPM3-201ENST00000271850 DNAJC13O75165 2243 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 HRNRQ86YZ3 2850 aaPredicted RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 A0A0G2JN53 185 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 A0A1B0GTH9 108 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 NPEPPSL1A6NEC2 478 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 E9PLN8 166 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 HS6ST1O60243 411 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 PRMT3O60678 531 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 KRT38O76015 456 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 SERPIND1P05546 499 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 ESRRAP11474 423 aaPredicted RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 ZNF37AP17032 561 aaPredicted RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 TFEBP19484 476 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 AHRP35869 848 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 SLC6A12P48065 614 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 FNTAP49354 379 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 CYB561P49447 251 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 RGS4P49798 205 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 SMSP52788 366 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 AP1S2P56377 157 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms