RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ERVK-19Q9WJR5 959 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 hCG_1807616A0A1W2PRN6 198 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 MFSD2BA6NFX1 497 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LYRM1O43325 122 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LANCL1O43813 399 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 TM4SF4P48230 202 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 PIK3CGP48736 1102 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 TAF6P49848 677 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 GZMMP51124 257 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 IKZF1Q13422 519 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 ZNF169Q14929 603 aaPredicted RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 SNAPC1Q16533 368 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SPANXN4Q5MJ08 99 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 BCL2L15Q5TBC7 163 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SDHAF4Q5VUM1 108 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 RTL4Q6ZR62 310 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SCN4BQ8IWT1 228 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LIX1Q8N485 282 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 AADATQ8N5Z0 425 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 CREB3L4Q8TEY5 395 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 HRASLS5Q96KN8 279 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 ZNF599Q96NL3 588 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 COL21A1Q96P44 957 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 RAD9AQ99638 391 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SARGQ9BW04 601 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 ABCG8Q9H221 673 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 FBXL2Q9UKC9 423 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 UBQLN1Q9UMX0 589 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 PPIEQ9UNP9 301 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 SUPT3HB4E1H0 165 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 THP07101 528 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 GABRB1P18505 474 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 MAGEA2P43356 314 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 GATMP50440 423 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LCP2Q13094 533 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 PDSS1Q5T2R2 415 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 MYDGFQ969H8 173 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 INTS12Q96CB8 462 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 MARVELD1Q9BSK0 173 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 INPP5KQ9BT40 448 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SLC29A3Q9BZD2 475 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 ZNF768Q9H5H4 540 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 HMX1Q9NP08 348 aaPredicted RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 THUMPD1Q9NXG2 353 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 ZIM2Q9NZV7 527 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 ISM1B1AKI9 464 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 HAS3O00219 553 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 CDC7O00311 574 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 GMDSO60547 372 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 AP2A2O94973 939 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LPLP06858 475 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SELLP14151 372 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 GRK4P32298 578 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 CDKN2CP42773 168 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 RORCP51449 518 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 NFKB2Q00653 900 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 BAMBIQ13145 260 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 IHHQ14623 411 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SPOUT1Q5T280 376 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 FAM92BQ6ZTR7 304 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LPCAT1Q8NF37 534 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 OR8J3Q8NGG0 315 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 WDR36Q8NI36 951 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 YIPF5Q969M3 257 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 MTERF3Q96E29 417 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 LDAHQ9H6V9 325 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 SLC28A3Q9HAS3 691 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 OLA1Q9NTK5 396 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 UBQLN2Q9UHD9 624 aa8.43□□□□□ -1.06
VAPB-201ENST00000265619 EXO1Q9UQ84 846 aaKnown RBP8.43□□□□□ -1.06
VAPB-201ENST00000265619 TRAV6A0A075B6T7 132 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 M0QYT0 321 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 QSOX1O00391 747 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 SLC30A4O14863 429 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CXCL14O95715 111 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 TNFRSF1BP20333 461 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 GPR17Q13304 367 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 KLHL22Q53GT1 634 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 LCN1P1Q5VSP4 162 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 MSANTD2Q6P1R3 559 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 BHLHB9Q6PI77 547 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 Q8N402 240 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 EDEM1Q92611 657 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 NELL1Q92832 810 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 TBC1D20Q96BZ9 403 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ULK4Q96C45 1275 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 TNIP3Q96KP6 325 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CRISPLD1Q9H336 500 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 LIPT1Q9Y234 373 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CDH10Q9Y6N8 788 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 OR2W5A6NFC9 320 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ARL5CA6NH57 179 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 G3V3Q6 166 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms