RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KCNK6Q9Y257 313 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 A0A1B0GVC2 190 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 DLGAP1O14490 977 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 VMACQ2NL98 169 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 ADGRF1Q5T601 910 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 PLD6Q8N2A8 252 aaKnown RBP17.39■□□□□ 0.37
COL5A3-201ENST00000264828 OR4K1Q8NGD4 311 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 S100PBPQ96BU1 408 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 TNFRSF10BO14763 440 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 TRAPPC6AO75865 159 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 MT-ND5P03915 603 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 GSTT2P0CG29 244 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 ADH5P11766 374 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 OR4K17Q8NGC6 315 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 XKR8Q9H6D3 395 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 COQ4Q9Y3A0 265 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
COL5A3-201ENST00000264828 LRRN3E7EW58 273 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 TNFP01375 233 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 LIPKQ5VXJ0 399 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 CILP2Q8IUL8 1156 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 SAMD12Q8N8I0 201 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 DBF4BQ8NFT6 615 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 FCAMRQ8WWV6 532 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 PHOX2BQ99453 314 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 LRRN3Q9H3W5 708 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 Q9N2J8 555 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 HTR3EA5X5Y0 456 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 EEF1E1O43324 174 aaKnown RBP17.38■□□□□ 0.37
COL5A3-201ENST00000264828 SNAP29O95721 258 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 PREPP48147 710 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 OTUB2Q96DC9 234 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 MUS81Q96NY9 551 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 CD244Q9BZW8 370 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 KCPQ6ZWJ8 1503 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 A0A1B0GVI7 797 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 RNF13O43567 381 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 NR0B1P51843 470 aaKnown RBP17.38■□□□□ 0.37
COL5A3-201ENST00000264828 CCDC58Q4VC31 144 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 MSANTD3Q96H12 275 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 FAM120CQ9NX05 1096 aaKnown RBP17.38■□□□□ 0.37
COL5A3-201ENST00000264828 NOX1Q9Y5S8 564 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 HERV-K104P61576 105 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 MYLK3Q32MK0 819 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 LINC00471Q8N535 108 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 OR56A1Q8NGH5 318 aa17.38■□□□□ 0.37
COL5A3-201ENST00000264828 SH3YL1Q96HL8 342 aaPredicted RBP17.38■□□□□ 0.37
COL5A3-201ENST00000264828 AIMP2Q13155 320 aaKnown RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 SEMA3AQ14563 771 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 METTL27Q8N6F8 245 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 NATD1Q8N6N6 113 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 MAFIPQ8WZ33 124 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 FUBP3Q96I24 572 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 GTPBP2Q9BX10 602 aaKnown RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 MAB21L2Q9Y586 359 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 ANKRD66B4E2M5 251 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 KLF11O14901 512 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 CAPN5O15484 640 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 FOXD2O60548 495 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 KCNJ5P48544 419 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 ABHD18Q0P651 414 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 LRRN1Q6UXK5 716 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 WFIKKN2Q8TEU8 576 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 BTBD1Q9H0C5 482 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 EXOSC1Q9Y3B2 195 aaKnown RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 PCDHGB2Q9Y5G2 931 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 SLC6A6P31641 620 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 GKP32189 559 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 DECR1Q16698 335 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 NKAPLQ5M9Q1 402 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 PHF19Q5T6S3 580 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 GTF2IRD2BQ6EKJ0 949 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 GTF2IRD2Q86UP8 949 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 ACDQ96AP0 544 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 YIPF1Q9Y548 306 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 HSPA12AO43301 675 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 FAM43BQ6ZT52 329 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-201ENST00000264828 OR6N2Q8NGY6 317 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 OSTF1Q92882 214 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 HSPA12BQ96MM6 686 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 RBCK1Q9BYM8 510 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 B3GAT2Q9NPZ5 323 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 PSAT1Q9Y617 370 aa17.37■□□□□ 0.37
COL5A3-201ENST00000264828 CA12O43570 354 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 SFTPBP07988 381 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 EBLN1P0CF75 366 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 EMX2Q04743 252 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF630Q2M218 657 aaPredicted RBP17.36■□□□□ 0.37
COL5A3-201ENST00000264828 KRTCAP2Q8N6L1 136 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 ERVK-18Q9QC07 812 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 HCN4Q9Y3Q4 1203 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 ARVCFO00192 962 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 FLRT2O43155 660 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 SLC19A2O60779 497 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 BCKDHAP12694 445 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 F8A1P23610 371 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 CASRP41180 1078 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms