RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 EP400NLQ6ZTU2 488 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 PIWIL3Q7Z3Z3 882 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 DCP2Q8IU60 420 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 ALDH16A1Q8IZ83 802 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 IL17RCQ8NAC3 791 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 LINC01555Q8NAE3 123 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 MAL2Q969L2 176 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 TMIGD2Q96BF3 282 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 NRBF2Q96F24 287 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 F2RL3Q96RI0 385 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 APOOQ9BUR5 198 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 AMBRA1Q9C0C7 1298 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 SLC6A16Q9GZN6 736 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 PREBQ9HCU5 417 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 VNN3Q9NY84 501 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 RSL24D1Q9UHA3 163 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 GPR37O15354 613 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 LATO43561 262 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 OR1F1O43749 312 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 KLF8O95600 359 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 KRT75O95678 551 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 ETFAP13804 333 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 FPR1P21462 350 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 IGFBP5P24593 272 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 ELK4P28324 431 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 MAT2AP31153 395 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 CTHP32929 405 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 BSGP35613 385 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 MVDP53602 400 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 LSAMPQ13449 338 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 ZBED5Q49AG3 693 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 COX20Q5RI15 118 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 RBM48Q5RL73 367 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 RGMAQ96B86 450 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 DOHHQ9BU89 302 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 MVB12BQ9H7P6 319 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 REEP1Q9H902 201 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 DDX18Q9NVP1 670 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 TAAR2Q9P1P5 351 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 ICKQ9UPZ9 632 aa12.36□□□□□ -0.43
SPTLC1-201ENST00000262554 LOC100130705A0A1B0GUX0 176 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 PDZK1P1A8MUH7 402 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 NDUFS4O43181 175 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 ADAM23O75077 832 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 TNFRSF21O75509 655 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 TBX6O95947 436 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 DDCP20711 480 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 AQP1P29972 269 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 PKLRP30613 574 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 SOAT1P35610 550 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 PIGAP37287 484 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 GSTM5P46439 218 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 CDK9P50750 372 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 ITGA1P56199 1179 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 CSNK1G2P78368 415 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 KCNJ10P78508 379 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 PRDX1Q06830 199 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 IL18R1Q13478 541 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 HTR4Q13639 388 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 HEPACAMQ14CZ8 416 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 UAP1L1Q3KQV9 507 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 ANKRD34AQ69YU3 496 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 ADCK2Q7Z695 626 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 NUDT13Q86X67 352 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 MPP4Q96JB8 637 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 NPLQ9BXD5 320 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 ZNF717Q9BY31 904 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 XKR8Q9H6D3 395 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 TMEM38AQ9H6F2 299 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 FZD3Q9NPG1 666 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 GPATCH2Q9NW75 528 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 TMEFF2Q9UIK5 374 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 ADAM29Q9UKF5 820 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 SAMHD1Q9Y3Z3 626 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 PLEKHM1Q9Y4G2 1056 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 HEATR5BQ9P2D3 2071 aa12.35□□□□□ -0.43
SPTLC1-201ENST00000262554 A0A1W2PQF6 199 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 RTCAO00442 366 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SLC16A6O15403 523 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SLC31A1O15431 190 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 KDM1AO60341 852 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 DPM1O60762 260 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 TBX19O60806 448 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 UGT2B11O75310 529 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 DIRAS1O95057 198 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 EGFP01133 1207 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ITGAMP11215 1152 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 COL9A1P20849 921 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 UQCRC2P22695 453 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 EEF1B2P24534 225 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms