RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 OR56A1Q8NGH5 318 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 ASB9Q96DX5 294 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 RBP7Q96R05 134 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 OR52B2Q96RD2 323 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 USP29Q9HBJ7 922 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 MANBAO00462 879 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 XRCC1P18887 633 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 HOXA10P31260 410 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 HNRNPA0Q13151 305 aaKnown RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 ASTE1Q2TB18 679 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 SLC10A6Q3KNW5 377 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 ASB6Q9NWX5 421 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 RNF11Q9Y3C5 154 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 EDDM13A0A1B0GTR0 161 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 AQP12BA6NM10 295 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 RAD51DO75771 328 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CSF2P04141 144 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 GTF2F2P13984 249 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 SCNN1AP37088 669 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 PIK3CBP42338 1070 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 FPGSQ05932 587 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 ZNF267Q14586 743 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 ABRAXAS2Q15018 415 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 GTF2IRD2BQ6EKJ0 949 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 SLC16A9Q7RTY1 509 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 GTF2IRD2Q86UP8 949 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 AQP12AQ8IXF9 295 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 PXYLP1Q8TE99 480 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 TFGQ92734 400 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 MAPKAP1Q9BPZ7 522 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 EIF5A2Q9GZV4 153 aaKnown RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 PCDHB16Q9NRJ7 776 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 ATXN7L1Q9ULK2 861 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 ZNF705EA8MWA4 302 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 CNOT4O95628 575 aaKnown RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 C8BP07358 591 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CD72P21854 359 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CCND3P30281 292 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 OR1E2P47887 323 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 MEF2AQ02078 507 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 UBE2UQ5VVX9 321 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CDKN2AIPNLQ96HQ2 116 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 NELFAQ9H3P2 528 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
CUX2-201ENST00000261726 RP2O75695 350 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 MT-ND5P03915 603 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 FASLGP48023 281 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CRHR2Q13324 411 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 EOGTQ5NDL2 527 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CLEC20AQ6ZU45 233 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 C10orf82Q8WW14 230 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 SLC5A11Q8WWX8 675 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CAPNS2Q96L46 248 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 CD320Q9NPF0 282 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 NCDNQ9UBB6 729 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 SALL4Q9UJQ4 1053 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 PCDHB3Q9Y5E6 796 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 WNT6Q9Y6F9 365 aa13.81□□□□□ -0.2
CUX2-201ENST00000261726 POLR2CP19387 275 aaPredicted RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 SOWAHAQ2M3V2 549 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 GALNT12Q8IXK2 581 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 TRMT10AQ8TBZ6 339 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 SLC30A2Q9BRI3 323 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 REV1Q9UBZ9 1251 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 A0A1B0GV50 99 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 DLDP09622 509 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 HOXB2P14652 356 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 S100PP25815 95 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 FBXO43Q4G163 708 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 TATDN1Q6P1N9 297 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 NATD1Q8N6N6 113 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 TCEANCQ8N8B7 351 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 GNPDA2Q8TDQ7 276 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 SMPDL3AQ92484 453 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 C1orf21Q9H246 121 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 TPT1P8Q9HAU6 139 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 HCN2Q9UL51 889 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 IRAK2O43187 625 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 LRRN1Q6UXK5 716 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 SMG8Q8ND04 991 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 SMG9Q9H0W8 520 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 YIPF1Q9Y548 306 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 BACE2Q9Y5Z0 518 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 A6NLC8 198 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 NOTOA8MTQ0 251 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 FAM227AF5H4B4 570 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 CHRNA1P02708 482 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 G6PDP11413 515 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 ZNF14P17017 642 aaPredicted RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 RPS3P23396 243 aaKnown RBP eCLIP13.8□□□□□ -0.2
CUX2-201ENST00000261726 GNMTQ14749 295 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 MYLK3Q32MK0 819 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 NCBP2-AS2Q69YL0 99 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 ACDQ96AP0 544 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms