RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 COX8CQ7Z4L0 72 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PTAR1Q7Z6K3 402 aaPredicted RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 ADCK1Q86TW2 530 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 ANKRD46Q86W74 232 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 CKAP2Q8WWK9 683 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 CTNNBL1Q8WYA6 563 aaPredicted RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PDLIM5Q96HC4 596 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 NECTIN4Q96NY8 510 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 RASL10BQ96S79 203 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PRMT1Q99873 361 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 UTP14AQ9BVJ6 771 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PNNQ9H307 717 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 SRD5A3Q9H8P0 318 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 RNF121Q9H920 327 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 IL1RAPL2Q9NP60 686 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 SCRT2Q9NQ03 307 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 EXOC1Q9NV70 894 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 ZNHIT6Q9NWK9 470 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 BARHL2Q9NY43 387 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 MIS18AQ9NYP9 233 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 CNIH4Q9P003 139 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 ACTR3BQ9P1U1 418 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 TMEM94Q12767 1356 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 PFASO15067 1338 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 TRBV4-1A0A0J9YWV2 114 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 RNF103-CHMP3A0A140T963 221 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CLRN2A0PK11 232 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ANTXRLA6NF34 631 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 H0YHG0 523 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 AP3B1O00203 1094 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 RNF103O00237 685 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CACNB4O00305 520 aaPredicted RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF195O14628 629 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 MCF2LO15068 1137 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CTDSPLO15194 276 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SAP30O75446 220 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF821O75541 412 aaPredicted RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SP9P0CG40 484 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ITIH1P19827 911 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CCNCP24863 283 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 PIK3R1P27986 724 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ADSSP30520 456 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SSTR1P30872 391 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SOX3P41225 446 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 IFNAR2P48551 515 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ATP12AP54707 1039 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ST8SIA6P61647 398 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SNRPD1P62314 119 aaKnown RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ARHGAP1Q07960 439 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SHROOM1Q2M3G4 852 aaPredicted RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ZFP69Q49AA0 526 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 IQCCQ4KMZ1 466 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 GLRA4Q5JXX5 417 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 HOGA1Q86XE5 327 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 TUSC5Q8IXB3 177 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 RAB42Q8N4Z0 105 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 MRPL43Q8N983 215 aaKnown RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 GMCL1P1Q8NEA9 526 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 MAPK15Q8TD08 544 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 SHC3Q92529 594 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF75CPQ92670 426 aaPredicted RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CNDP1Q96KN2 507 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 LURAP1Q96LR2 239 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF300Q96RE9 604 aaPredicted RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 TCHPQ9BT92 498 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CLEC7AQ9BXN2 247 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 MMADHCQ9H3L0 296 aaPredicted RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 VPS37BQ9H9H4 285 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 TRPV5Q9NQA5 729 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 GPR173Q9NS66 373 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 ABCB8Q9NUT2 735 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CLIP2Q9UDT6 1046 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 IL19Q9UHD0 177 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 CFAP45Q9UL16 551 aa3.82□□□□□ -1.8
CCDC54-201ENST00000261058 MRPS28Q9Y2Q9 187 aaKnown RBP3.82□□□□□ -1.8
CCDC54-201ENST00000261058 K7EPI3 171 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 UBXN8O00124 270 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 SCO2O43819 266 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 NEMFO60524 1076 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 KLHL41O60662 606 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 CYTIPO60759 359 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 RTN2O75298 545 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 NME6O75414 186 aaPredicted RBP3.81□□□□□ -1.8
CCDC54-201ENST00000261058 MTRF1O75570 445 aaKnown RBP3.81□□□□□ -1.8
CCDC54-201ENST00000261058 GH1P01241 217 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 EDNRAP25101 427 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 HLA-FP30511 346 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 CASP3P42574 277 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 ARFIP1P53367 373 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 XGP55808 180 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 GMFBP60983 142 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 PMP22Q01453 160 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 C17orf67Q0P5P2 114 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 RPA4Q13156 261 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 TMEM187Q14656 261 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 TMEM132DQ14C87 1099 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 MRGPRG-AS1Q2M3A8 158 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 DHRS11Q6UWP2 260 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms