RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 STXBP1P61764 594 aaKnown RBP17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 RBPJQ06330 500 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 C2orf54Q08AI8 447 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 CALCOCO2Q13137 446 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 CBLBQ13191 982 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 OR4D1Q15615 310 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 SLC25A25Q6KCM7 469 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 GPSM1Q86YR5 675 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 KLHDC8AQ8IYD2 350 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 LGI4Q8N135 537 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 TMEM178AQ8NBL3 297 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 THAP3Q8WTV1 239 aaPredicted RBP17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 GAL3ST3Q96A11 431 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 MS4A6EQ96DS6 147 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 FRMD6Q96NE9 622 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 CLK4Q9HAZ1 481 aaKnown RBP17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 TXNDC16Q9P2K2 825 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 SUCOQ9UBS9 1254 aaKnown RBP17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 TINAGQ9UJW2 476 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 APCP25054 2843 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 GTF3C1Q12789 2109 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 TCRBV9S1A1TA0A576 114 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 LRIT2A6NDA9 550 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 PRAMEF4O60810 478 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 CD1DP15813 335 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 GRNP28799 593 aaKnown RBP17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 PPP2R1BP30154 601 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 HSPA7P48741 367 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 HNRNPFP52597 415 aaKnown RBP17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 PLA2G16P53816 162 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 MLF1P58340 268 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 C3AR1Q16581 482 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 PRAMEF9Q5VWM5 478 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 MRGPRGQ86SM5 289 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 ZNF227Q86WZ6 799 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 HORMAD2Q8N7B1 307 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 TMEM52Q8NDY8 209 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 ARMC2Q8NEN0 867 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 SPATA4Q8NEY3 305 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 CDKL2Q92772 493 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 EXT2Q93063 718 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 MARVELD3Q96A59 401 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 TSPAN17Q96FV3 270 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 PDLIM2Q96JY6 352 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 GPR137Q96N19 417 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 RBBP8Q99708 897 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 DEFB126Q9BYW3 111 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 PNO1Q9NRX1 252 aaKnown RBP17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 GRHL1Q9NZI5 618 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 WHRNQ9P202 907 aa17.78■□□□□ 0.44
TM6SF1-201ENST00000258909 ASPDHA6ND91 283 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 FAM187AA6NFU0 413 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 TGFBR3LH3BV60 316 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 SLC25A12O75746 678 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 MYO1DO94832 1006 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 TBX6O95947 436 aaPredicted RBP17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 PRF1P14222 555 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 C3orf62Q6ZUJ4 267 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 VN1R5Q7Z5H4 357 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 SLC34A3Q8N130 599 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 KRT78Q8N1N4 520 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 SNX31Q8N9S9 440 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 FAM47BQ8NA70 645 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 ANP32BQ92688 251 aaKnown RBP17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 CPNE1Q99829 537 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 DNAJC11Q9NVH1 559 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 ENTPD4Q9Y227 616 aa17.77■□□□□ 0.44
TM6SF1-201ENST00000258909 TRBV11-1A0A0K0K1C0 115 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 MYOCOSA0A1B0GUC4 107 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 ANKDD1BA6NHY2 528 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 FAM155BO75949 473 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 STMN1P16949 149 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 CYB561P49447 251 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 GPX6P59796 221 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 HSF1Q00613 529 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 XKR6Q5GH73 641 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 RNFT1Q5M7Z0 435 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 CTAGE3PQ8IX95 158 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 CPSF7Q8N684 471 aaKnown RBP17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 APCDD1LQ8NCL9 501 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 TTLQ8NG68 377 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 MAGED4Q96JG8 741 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 GPR22Q99680 433 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 PRTFDC1Q9NRG1 225 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 CD274Q9NZQ7 290 aa17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF490Q9ULM2 529 aaPredicted RBP17.76■□□□□ 0.43
TM6SF1-201ENST00000258909 FAM159BA6NKW6 160 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CLGNO14967 610 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 HNRNPRO43390 633 aaKnown RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 B3GALT2O43825 422 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 NME2P1O60361 137 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 STK16O75716 305 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 C1QAP02745 245 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CD22P20273 847 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 NME2P22392 152 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CERS1P27544 350 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 GGT5P36269 586 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 GP5P40197 560 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 KCNC1P48547 511 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms