RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 MAGEB10Q96LZ2 347 aaPredicted RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 DCLRE1CQ96SD1 692 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 SYNDIG1Q9H7V2 258 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TMEM39AQ9NV64 488 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 MRPL39Q9NYK5 338 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 FTSJ1Q9UET6 329 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PLEKHB1Q9UF11 243 aaPredicted RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC23A1Q9UHI7 598 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PCDHGB7Q9Y5F8 929 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 AUP1Q9Y679 476 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 KCNE1BA0A087WTH5 132 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 SNTNA6NMZ2 147 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 GPR39O43194 453 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 OR7A10O76100 309 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 SLC2A2P11168 524 aaPredicted RBP11.04□□□□□ -0.64
TROAP-201ENST00000257909 CKMT1AP12532 417 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 EPORP19235 508 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 CNR2P34972 360 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 HMGA2P52926 109 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 SNRPGP62308 76 aaKnown RBP11.04□□□□□ -0.64
TROAP-201ENST00000257909 FRMPD2BQ6IN97 320 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 LRRC70Q7Z2Q7 622 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 HDDC2Q7Z4H3 204 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 SERPINA9Q86WD7 417 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 OR7D4Q8NG98 312 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 FAM129BQ96TA1 746 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 MARVELD1Q9BSK0 173 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ACAT2Q9BWD1 397 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 LATS2Q9NRM7 1088 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 TXNL4BQ9NX01 149 aaKnown RBP11.04□□□□□ -0.64
TROAP-201ENST00000257909 FLRT1Q9NZU1 646 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 IL17CQ9P0M4 197 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 MARCH2Q9P0N8 246 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 PHF11Q9UIL8 331 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 NDRG2Q9UN36 371 aaKnown RBP11.04□□□□□ -0.64
TROAP-201ENST00000257909 FAM240BA0A1B0GVZ2 78 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ARRDC5A6NEK1 342 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 WASHC1A8K0Z3 465 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 PLD2O14939 933 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 AP2A2O94973 939 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 POU2F1P14859 743 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 TACR2P21452 398 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 C21orf58P58505 322 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 IKZF1Q13422 519 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 WSCD2Q2TBF2 565 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ZNF628Q5EBL2 1059 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ZNF598Q86UK7 904 aaKnown RBP11.04□□□□□ -0.64
TROAP-201ENST00000257909 PHC2Q8IXK0 858 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 FAM217AQ8IXS0 508 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 NANOGP1Q8N7R0 232 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ATP6V1C2Q8NEY4 427 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 VPS37AQ8NEZ2 397 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 OR8H1Q8NGG4 311 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 LKAAEAR1Q8TD35 194 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 MAL2Q969L2 176 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 GTPBP3Q969Y2 492 aaKnown RBP11.04□□□□□ -0.64
TROAP-201ENST00000257909 MED18Q9BUE0 208 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 ABCG8Q9H221 673 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 MCUBQ9NWR8 336 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 BTNL2Q9UIR0 455 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 TMCC3Q9ULS5 477 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 CENPFP49454 3210 aa11.04□□□□□ -0.64
TROAP-201ENST00000257909 F5H5T6 163 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 KDELR3O43731 214 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 ENTPD6O75354 484 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 MTRF1O75570 445 aaKnown RBP11.03□□□□□ -0.64
TROAP-201ENST00000257909 GCM2O75603 506 aaPredicted RBP11.03□□□□□ -0.64
TROAP-201ENST00000257909 RFPL3O75679 317 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 TSPAN9O75954 239 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 SLC22A5O76082 557 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 TBX18O95935 607 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 IGLV3-27P01718 113 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 ARSBP15848 533 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 SDC2P34741 201 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 LIMS1P48059 325 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 PPP3R1P63098 170 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 RING1Q06587 406 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 GPRC6AQ5T6X5 926 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 METAP1DQ6UB28 335 aaPredicted RBP11.03□□□□□ -0.64
TROAP-201ENST00000257909 Q8N402 240 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 PIH1D2Q8WWB5 315 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 AKAP1Q92667 903 aaKnown RBP eCLIP11.03□□□□□ -0.64
TROAP-201ENST00000257909 MYEOVQ96EZ4 313 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 NECTIN4Q96NY8 510 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 QRFPRQ96P65 431 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 COPS8Q99627 209 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 C17orf62Q9BQA9 187 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 AIFM2Q9BRQ8 373 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 SPON2Q9BUD6 331 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 DUSP26Q9BV47 211 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 EBPLQ9BY08 206 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 CRISPLD1Q9H336 500 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 ACER3Q9NUN7 267 aa11.03□□□□□ -0.64
TROAP-201ENST00000257909 ABI2Q9NYB9 513 aaPredicted RBP11.03□□□□□ -0.64
TROAP-201ENST00000257909 CLEC2DQ9UHP7 191 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms