RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 LOC105369274A0A096LPK9 316 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C15orf38-AP3S2A0A0A6YYH1 394 aa9□□□□□ -0.97
NIP7-202ENST00000254941 LOC102723532A0A0G2JNH3 316 aa9□□□□□ -0.97
NIP7-202ENST00000254941 PRORSD1PA6NEY8 169 aa9□□□□□ -0.97
NIP7-202ENST00000254941 TLCD2A6NGC4 264 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C4orf51C9J302 202 aa9□□□□□ -0.97
NIP7-202ENST00000254941 H0YGG7 62 aa9□□□□□ -0.97
NIP7-202ENST00000254941 NME4O00746 187 aa9□□□□□ -0.97
NIP7-202ENST00000254941 TMPRSS11DO60235 418 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ERN1O75460 977 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 IL3P08700 152 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ALPPL2P10696 532 aa9□□□□□ -0.97
NIP7-202ENST00000254941 HIST1H1TP22492 207 aaPredicted RBP9□□□□□ -0.97
NIP7-202ENST00000254941 ME2P23368 584 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ATP5A1P25705 553 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 PTPN6P29350 595 aa9□□□□□ -0.97
NIP7-202ENST00000254941 SSR2P43308 183 aa9□□□□□ -0.97
NIP7-202ENST00000254941 HNRNPFP52597 415 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 NUBP1P53384 320 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ACTR3P61158 418 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ARF3P61204 181 aaPredicted RBP9□□□□□ -0.97
NIP7-202ENST00000254941 TRA2BP62995 288 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 MC1RQ01726 317 aa9□□□□□ -0.97
NIP7-202ENST00000254941 KLC1Q07866 573 aa9□□□□□ -0.97
NIP7-202ENST00000254941 TGM3Q08188 693 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C2orf80Q0P641 193 aa9□□□□□ -0.97
NIP7-202ENST00000254941 KPNB1Q14974 876 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 HEPACAMQ14CZ8 416 aa9□□□□□ -0.97
NIP7-202ENST00000254941 SPATS1Q496A3 300 aa9□□□□□ -0.97
NIP7-202ENST00000254941 TRIM61Q5EBN2 209 aa9□□□□□ -0.97
NIP7-202ENST00000254941 TOR1AIP1Q5JTV8 583 aa9□□□□□ -0.97
NIP7-202ENST00000254941 MANEAQ5SRI9 462 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C6orf10Q5SRN2 563 aa9□□□□□ -0.97
NIP7-202ENST00000254941 LRIF1Q5T3J3 769 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C6orf163Q5TEZ5 329 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
NIP7-202ENST00000254941 FBXW10Q5XX13 1052 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ANKRD26P1Q6NSI1 321 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ARPINQ7Z6K5 226 aa9□□□□□ -0.97
NIP7-202ENST00000254941 OR4N4Q8N0Y3 316 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ZCCHC7Q8N3Z6 543 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 RNF148Q8N7C7 305 aa9□□□□□ -0.97
NIP7-202ENST00000254941 C19orf47Q8N9M1 422 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 KCT2Q8NC54 265 aa9□□□□□ -0.97
NIP7-202ENST00000254941 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
NIP7-202ENST00000254941 RERGQ96A58 199 aaPredicted RBP9□□□□□ -0.97
NIP7-202ENST00000254941 TM4SF18Q96CE8 201 aa9□□□□□ -0.97
NIP7-202ENST00000254941 CCDC124Q96CT7 223 aaKnown RBP9□□□□□ -0.97
NIP7-202ENST00000254941 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
NIP7-202ENST00000254941 CD180Q99467 661 aa9□□□□□ -0.97
NIP7-202ENST00000254941 CGREF1Q99674 301 aa9□□□□□ -0.97
NIP7-202ENST00000254941 MAP3K3Q99759 626 aa9□□□□□ -0.97
NIP7-202ENST00000254941 DUSP26Q9BV47 211 aa9□□□□□ -0.97
NIP7-202ENST00000254941 BHLHE41Q9C0J9 482 aaPredicted RBP9□□□□□ -0.97
NIP7-202ENST00000254941 CHRNA10Q9GZZ6 450 aa9□□□□□ -0.97
NIP7-202ENST00000254941 IL21RQ9HBE5 538 aa9□□□□□ -0.97
NIP7-202ENST00000254941 FAM60AQ9NP50 221 aa9□□□□□ -0.97
NIP7-202ENST00000254941 ATAD3AQ9NVI7 634 aa9□□□□□ -0.97
NIP7-202ENST00000254941 VAPAQ9P0L0 249 aa9□□□□□ -0.97
NIP7-202ENST00000254941 PACSIN3Q9UKS6 424 aa9□□□□□ -0.97
NIP7-202ENST00000254941 PADI4Q9UM07 663 aa9□□□□□ -0.97
NIP7-202ENST00000254941 NEUROG3Q9Y4Z2 214 aa9□□□□□ -0.97
NIP7-202ENST00000254941 GPR179Q6PRD1 2367 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 A0A096LPI6 279 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 TRBV5-3A0A0A0MS03 114 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 A0A0G2JN53 185 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 PRSS51A0A1B0GVH4 220 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 URADA6NGE7 173 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 SLC9B1P1A6NJY1 282 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 TRIM38O00635 465 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 RFXANKO14593 260 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ZSCAN9O15535 394 aaPredicted RBP8.99□□□□□ -0.97
NIP7-202ENST00000254941 P2RX6O15547 441 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 SH3BP5O60239 455 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ENTPD5O75356 428 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 SCELO95171 688 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 CER1O95813 267 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 SYPP08247 313 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 SMIM10L1P0DMW3 83 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 PNLIPP16233 465 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 HOXB9P17482 250 aaPredicted RBP8.99□□□□□ -0.97
NIP7-202ENST00000254941 DDCP20711 480 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 TRPC1P48995 793 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 CCT8P50990 548 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 OR1D5P58170 312 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 GPLD1P80108 840 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 PLIN5Q00G26 463 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 LRRC74AQ0VAA2 488 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 SLC9A5Q14940 896 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ANXA8L1Q5VT79 327 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 MRM1Q6IN84 353 aaKnown RBP8.99□□□□□ -0.97
NIP7-202ENST00000254941 FAM92BQ6ZTR7 304 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ANKRD46Q86W74 232 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ZNF655Q8N720 491 aaPredicted RBP8.99□□□□□ -0.97
NIP7-202ENST00000254941 AMER3Q8N944 861 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 ACOT4Q8N9L9 421 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 FAM181AQ8N9Y4 354 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 VPS37AQ8NEZ2 397 aa8.99□□□□□ -0.97
NIP7-202ENST00000254941 OR6C4Q8NGE1 309 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms