RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CSNK2BP67870 215 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 CNTN1Q12860 1018 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 KRT33BQ14525 404 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 MPP7Q5T2T1 576 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 ASTLQ6HA08 431 aaPredicted RBP17.7■□□□□ 0.42
LRP3-201ENST00000253193 ZNF740Q8NDX6 193 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 LYSMD1Q96S90 227 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 CNPPD1Q9BV87 410 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 MARCH7Q9H992 704 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 NDUFAF4Q9P032 175 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 LYVE1Q9Y5Y7 322 aa17.7■□□□□ 0.42
LRP3-201ENST00000253193 MXD1Q05195 221 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 RUNX1T1Q06455 604 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 COL9A2Q14055 689 aaPredicted RBP17.69■□□□□ 0.42
LRP3-201ENST00000253193 ARHGEF6Q15052 776 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 PRSS36Q5K4E3 855 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 DEPDC1Q5TB30 811 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 GPR65Q8IYL9 337 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 OR9Q1Q8NGQ5 310 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 GGHQ92820 318 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 OTULINQ96BN8 352 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 OR4K3Q96R72 315 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 KLHL42Q9P2K6 505 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 ERVK-11Q9UQG0 969 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 HTTP42858 3142 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 EFCAB10A6NFE3 127 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 PDZK1P1A8MUH7 402 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 PSMD11O00231 422 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 GFRA2O00451 464 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 WBP4O75554 376 aaKnown RBP17.69■□□□□ 0.42
LRP3-201ENST00000253193 BCHEP06276 602 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 IL3P08700 152 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 KCNJ10P78508 379 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 SLC5A12Q1EHB4 618 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 C10orf62Q5T681 223 aaPredicted RBP17.69■□□□□ 0.42
LRP3-201ENST00000253193 CEACAM20Q6UY09 585 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 CCDC177Q9NQR7 707 aaPredicted RBP17.69■□□□□ 0.42
LRP3-201ENST00000253193 TDP1Q9NUW8 608 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 IL36AQ9UHA7 158 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 MAPRE3Q9UPY8 281 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 FAM227AF5H4B4 570 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 LOC110117498-PIK3R3F6TDL0 507 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 STATHP02808 62 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 KRT8P05787 483 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 CKMT1AP12532 417 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 JUNDP17535 347 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 IL1RNP18510 177 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 PPP5CP53041 499 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 MTAPQ13126 283 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 KCNC3Q14003 757 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 SLAIN1Q8ND83 568 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 DYNC2LI1Q8TCX1 351 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 ZNF480Q8WV37 535 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 XAGE5Q8WWM1 108 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 OTUB1Q96FW1 271 aaPredicted RBP17.69■□□□□ 0.42
LRP3-201ENST00000253193 ZDHHC4Q9NPG8 344 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 ERVW-1Q9UQF0 538 aa17.69■□□□□ 0.42
LRP3-201ENST00000253193 CAB39Q9Y376 341 aaPredicted RBP17.69■□□□□ 0.42
LRP3-201ENST00000253193 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 RSBN1Q5VWQ0 802 aaPredicted RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 CPXM2Q8N436 756 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 CAPSLQ8WWF8 208 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 ITPKCQ96DU7 683 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 ZNF300Q96RE9 604 aaPredicted RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 ZCCHC2Q9C0B9 1178 aaKnown RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 NINQ8N4C6 2090 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 SYNDIG1LA6NDD5 238 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 FGF18O76093 207 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 SPNP16150 400 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 GGT2P36268 569 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 TCEA2Q15560 299 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 FNDC3BQ53EP0 1204 aaKnown RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 ZNF385BQ569K4 471 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 CACTIN-AS1Q8N1I8 211 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 SYNPOQ8N3V7 929 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 TRAM1L1Q8N609 369 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 YIPF6Q96EC8 236 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 HRASLS5Q96KN8 279 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 COL21A1Q96P44 957 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 EPYCQ99645 322 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.68■□□□□ 0.42
LRP3-201ENST00000253193 TMEM184CQ9NVA4 438 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 TAS2R9Q9NYW1 312 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 OR2A25A4D2G3 310 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 TCEA1P23193 301 aaKnown RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 RPS26P11Q5JNZ5 115 aaPredicted RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 CCDC71Q8IV32 467 aaPredicted RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 WDR20Q8TBZ3 569 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 GEMIN6Q8WXD5 167 aaKnown RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 ZNF566Q969W8 418 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 MCCC1Q96RQ3 725 aaPredicted RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 BTBD2Q9BX70 525 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 CPEB1Q9BZB8 566 aaKnown RBP17.68■□□□□ 0.42
LRP3-201ENST00000253193 C14orf119Q9NWQ9 140 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 DNAJC27Q9NZQ0 273 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 HCN4Q9Y3Q4 1203 aa17.68■□□□□ 0.42
LRP3-201ENST00000253193 AP2A2O94973 939 aa17.67■□□□□ 0.42
LRP3-201ENST00000253193 TIMP2P16035 220 aa17.67■□□□□ 0.42
LRP3-201ENST00000253193 CD40LGP29965 261 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms