RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 BTG2P78543 158 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 RUNX2Q13950 521 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 SFT2D3Q587I9 215 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 B3GNTL1Q67FW5 361 aaPredicted RBP21.59■■□□□ 1.05
LSM4-201ENST00000252816 PLAG1Q6DJT9 500 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 OR2L5Q8NG80 312 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 FAR2Q96K12 515 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 ILKAPQ9H0C8 392 aaPredicted RBP21.59■■□□□ 1.05
LSM4-201ENST00000252816 EPB41L4BQ9H329 900 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 EPS8L2Q9H6S3 715 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 SIX3O95343 332 aaPredicted RBP21.58■■□□□ 1.05
LSM4-201ENST00000252816 SNRPAP09012 282 aaKnown RBP21.58■■□□□ 1.05
LSM4-201ENST00000252816 MYBL2P10244 700 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 ICAM2P13598 275 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 PCBP2Q15366 365 aaKnown RBP eCLIP21.58■■□□□ 1.05
LSM4-201ENST00000252816 HIST2H2ACQ16777 129 aaPredicted RBP21.58■■□□□ 1.05
LSM4-201ENST00000252816 HIST2H2AA3Q6FI13 130 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 ABHD17CQ6PCB6 329 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 QSOX2Q6ZRP7 698 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 LAS2Q8IYD9 372 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 ZNF473Q8WTR7 871 aaKnown RBP21.58■■□□□ 1.05
LSM4-201ENST00000252816 F2RL3Q96RI0 385 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 MS4A8Q9BY19 250 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 XPR1Q9UBH6 696 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 PCDHGA10Q9Y5H3 936 aa21.58■■□□□ 1.05
LSM4-201ENST00000252816 RP1L1Q8IWN7 2480 aaPredicted RBP21.58■■□□□ 1.05
LSM4-201ENST00000252816 SHANK1Q9Y566 2161 aa21.58■■□□□ 1.04
LSM4-201ENST00000252816 PSMD12O00232 456 aaPredicted RBP21.57■■□□□ 1.04
LSM4-201ENST00000252816 PRMT3O60678 531 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 RBP1P09455 135 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 BTBD16Q32M84 506 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 MED27Q6P2C8 311 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 TRIM40Q6P9F5 258 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 PAPD4Q6PIY7 484 aaKnown RBP21.57■■□□□ 1.04
LSM4-201ENST00000252816 UBE3DQ7Z6J8 389 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 IQCKQ8N0W5 287 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 EFCAB3Q8N7B9 438 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 PTGR2Q8N8N7 351 aaPredicted RBP21.57■■□□□ 1.04
LSM4-201ENST00000252816 CATSPER1Q8NEC5 780 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 OR7G3Q8NG95 312 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 DNAJB14Q8TBM8 379 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 SNRNP40Q96DI7 357 aaKnown RBP21.57■■□□□ 1.04
LSM4-201ENST00000252816 C19orf60Q96EN9 201 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 PTCHD1Q96NR3 888 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 NPLQ9BXD5 320 aaPredicted RBP21.57■■□□□ 1.04
LSM4-201ENST00000252816 PLA2G3Q9NZ20 509 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 ANGPTL3Q9Y5C1 460 aa21.57■■□□□ 1.04
LSM4-201ENST00000252816 E2F3O00716 465 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 PCNAP12004 261 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 COL6A2P12110 1019 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 MAOAP21397 527 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 CERS1P27544 350 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 OR4D2P58180 307 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 ACTN3Q08043 901 aaPredicted RBP21.56■■□□□ 1.04
LSM4-201ENST00000252816 GTF2H2Q13888 395 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 SLC29A2Q14542 456 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 GRHL2Q6ISB3 625 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 GTF2H2CQ6P1K8 395 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 ADGRD1Q6QNK2 874 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 GOLGA7Q7Z5G4 137 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 RNF175Q8N4F7 328 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 CISD2Q8N5K1 135 aaKnown RBP21.56■■□□□ 1.04
LSM4-201ENST00000252816 UBE2E3Q969T4 207 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 SCYL1Q96KG9 808 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 CNDP1Q96KN2 507 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 NECTIN3Q9NQS3 549 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 PRDM7Q9NQW5 492 aa21.56■■□□□ 1.04
LSM4-201ENST00000252816 IGKV3D-11A0A0A0MRZ8 115 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 B3GALT2O43825 422 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 SH3BGRLO75368 114 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 HPDP32754 393 aaPredicted RBP21.55■■□□□ 1.04
LSM4-201ENST00000252816 AP2B1P63010 937 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 TSNAXIP1Q2TAA8 658 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 TEX35Q5T0J7 233 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 ATCAYQ86WG3 371 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 TMEM52Q8NDY8 209 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 PHF21BQ96EK2 531 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 SERINC2Q96SA4 455 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 LPAR4Q99677 370 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 PRDM9Q9NQV7 894 aa21.55■■□□□ 1.04
LSM4-201ENST00000252816 TNPO3Q9Y5L0 923 aaKnown RBP21.55■■□□□ 1.04
LSM4-201ENST00000252816 FLNBO75369 2602 aaKnown RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 A0A088AWK7 358 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 TGFB1P01137 390 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 ZNF10P21506 573 aaPredicted RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 EEF1DP29692 281 aaKnown RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 UQCRFS1P47985 274 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 HNRNPFP52597 415 aaKnown RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 MTTPP55157 894 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 ZNF169Q14929 603 aaPredicted RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 EXT1Q16394 746 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 ZNF793Q6ZN11 406 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 TIFABQ6ZNK6 161 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 MYLK4Q86YV6 388 aaPredicted RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 TMEM151AQ8N4L1 468 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 GALNT11Q8NCW6 608 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 M1APQ8TC57 530 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 IPPKQ9H8X2 491 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 ACTR8Q9H981 624 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 MMP25Q9NPA2 562 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms