RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 LIN28AQ9H9Z2 209 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 RXFP3Q9NSD7 469 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 ICKQ9UPZ9 632 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 DLGAP4Q9Y2H0 992 aa16.23■□□□□ 0.19
CDKN1A-201ENST00000244741 CROCCQ5TZA2 2017 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 LNP1A1A4G5 178 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 PPM1DO15297 605 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 NOBOXO60393 691 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 GMNNO75496 209 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 KRT6AP02538 564 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 KRT6BP04259 564 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 PSMB5P28074 263 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 KRT6CP48668 564 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 NEK2P51955 445 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 PNLIPRP1P54315 467 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 SPEM2Q0P670 501 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 ZIK1Q3SY52 487 aaPredicted RBP16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 LAIR1Q6GTX8 287 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 PRR23CQ6ZRP0 262 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 FAM20CQ8IXL6 584 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 ARL14Q8N4G2 192 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 LINC01555Q8NAE3 123 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 FBXO30Q8TB52 745 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 ADAMTS16Q8TE57 1224 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 SAP25Q8TEE9 199 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 LCN9Q8WX39 176 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 FBXL8Q96CD0 374 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 LOXL4Q96JB6 756 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 OCEL1Q9H607 264 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 MVB12BQ9H7P6 319 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 ADGRE2Q9UHX3 823 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 HEBP2Q9Y5Z4 205 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 PCDH15Q96QU1 1955 aa16.22■□□□□ 0.19
CDKN1A-201ENST00000244741 CASC3O15234 703 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 DEAF1O75398 565 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 ARSFP54793 590 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 TBPL1P62380 186 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 UBE2IP63279 158 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 TAP2Q03519 686 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 BIRC2Q13490 618 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 CDKL4Q5MAI5 379 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 FBXO15Q8NCQ5 510 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 SELENOMQ8WWX9 145 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 KIR3DX1Q9H7L2 352 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 UTS2RQ9UKP6 389 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 RIF1Q5UIP0 2472 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 DMXL1Q9Y485 3027 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 KCNE1BA0A087WTH5 132 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 TRBV5-3A0A0A0MS03 114 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 KIR2DS5A0A0G2JLQ3 304 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 A0A0G2JNG1 304 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 KIR2DS3K7RE56 304 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 SYPP08247 313 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 HNMTP50135 292 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 KIR2DS5Q14953 304 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 PLA2G2CQ5R387 149 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 OR4K3Q96R72 315 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 PAIP1Q9H074 479 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 SH2B3Q9UQQ2 575 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 PCDHGA5Q9Y5G8 931 aa16.21■□□□□ 0.19
CDKN1A-201ENST00000244741 ELOVL7A1L3X0 281 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SLC34A2O95436 690 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 CER1O95813 267 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SLC6A12P48065 614 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 PPM1FP49593 454 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 ALDH3A2P51648 485 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 DAG1Q14118 895 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 ZBED5Q49AG3 693 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 GPR141Q7Z602 305 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SLC9B2Q86UD5 537 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 STK32CQ86UX6 486 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 THOC6Q86W42 341 aaKnown RBP16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SLC35F3Q8IY50 421 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 C10orf111Q8N326 155 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 EID2Q8N6I1 236 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 OR10G6Q8NH81 332 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SH3KBP1Q96B97 665 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 NPLQ9BXD5 320 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 UGT2B28Q9BY64 529 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SPHK1Q9NYA1 384 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 PCDHB14Q9Y5E9 798 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 CXCR6O00574 342 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 PRAMEF4O60810 478 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 B3GALT4O96024 378 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 ALBP02768 609 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 ALPLP05186 524 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 RETP07949 1114 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 TYRP1P17643 537 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 TACR1P25103 407 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 RAB28P51157 221 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 IST1P53990 364 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 CLDN8P56748 225 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 PRAMEF9Q5VWM5 478 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 LRRC70Q7Z2Q7 622 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 KANSL1Q7Z3B3 1105 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 ERI1Q8IV48 349 aaKnown RBP16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 AURKBQ96GD4 344 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 MUS81Q96NY9 551 aa16.2■□□□□ 0.18
CDKN1A-201ENST00000244741 SRMSQ9H3Y6 488 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms