RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 GPR37L1O60883 481 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 C1orf105O95561 183 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 TGFB1P01137 390 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 HSMCR30P0CW71 290 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 POU2F1P14859 743 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 GABRB1P18505 474 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 POLR2EP19388 210 aaKnown RBP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 SOAT1P35610 550 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 CYP4F2P78329 520 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 OLR1P78380 273 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 DMC1Q14565 340 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 STARD3Q14849 445 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 EIF4HQ15056 248 aaKnown RBP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF630Q2M218 657 aaPredicted RBP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 ARMCX4Q5H9R4 360 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 HIST2H2AA3Q6FI13 130 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 CCDC80Q76M96 950 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 ARMCX6Q7L4S7 300 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 RNF130Q86XS8 419 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.94■□□□□ 0.466e-6■■■□□ 15.1
CPSF3-201ENST00000238112 CYB5D2Q8WUJ1 264 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 RAD9AQ99638 391 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 DMRT3Q9NQL9 472 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 C1GALT1Q9NS00 363 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 PRAMEF25A6NGN4 478 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 TBX1O43435 398 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 PTHP01270 115 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 ELFN1P0C7U0 828 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 NNMTP40261 264 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CDC42P60953 191 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CDC20Q12834 499 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 SLC13A2Q13183 592 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 TPRG1LQ5T0D9 272 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CCDC149Q6ZUS6 474 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 TECPR1Q7Z6L1 1165 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 C16orf78Q8WTQ4 265 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 IRF7Q92985 503 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 GTPBP3Q969Y2 492 aaKnown RBP17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CRELD1Q96HD1 420 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 FAM129BQ96TA1 746 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 OR51E2Q9H255 320 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 OR51B5Q9H339 312 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 TRIM39Q9HCM9 518 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 SACM1LQ9NTJ5 587 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 MS4A12Q9NXJ0 267 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 TAS2R9Q9NYW1 312 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CCDC59Q9P031 241 aaKnown RBP17.93■□□□□ 0.46
CPSF3-201ENST00000238112 ANKMY1Q9P2S6 941 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 ENOPH1Q9UHY7 261 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 ANGPT4Q9Y264 503 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 HCN4Q9Y3Q4 1203 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 PIPSLA2A3N6 862 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 PLK4O00444 970 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CCNB2O95067 398 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 GADD45GO95257 159 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 C1GALT1C1LP0DN25 315 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 RGS6P49758 472 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 TAS2R50P59544 299 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 PDE7AQ13946 482 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 SLC5A12Q1EHB4 618 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 CRB2Q5IJ48 1285 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 DPPA4Q7L190 304 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF557Q8N988 423 aaPredicted RBP17.93■□□□□ 0.46
CPSF3-201ENST00000238112 WDR48Q8TAF3 677 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 SORCS1Q8WY21 1168 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 HTRA1Q92743 480 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 IL36AQ9UHA7 158 aa17.93■□□□□ 0.46
CPSF3-201ENST00000238112 MYOFQ9NZM1 2061 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 TSPAN11A1L157 253 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 M0R129 80 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 PCDH17O14917 1159 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 LILRB3O75022 631 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 GNRH1P01148 92 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 NPPBP16860 134 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 GRK5P34947 590 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 XCR1P46094 333 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 SEPHS1P49903 392 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 NLRP8Q86W28 1048 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 POC5Q8NA72 575 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 CHCHD6Q9BRQ6 235 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 MYNNQ9NPC7 610 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 RAB23Q9ULC3 237 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 SH2B3Q9UQQ2 575 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 PLXNA2O75051 1894 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 PRAMEF33A0A0G2JMD5 474 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 DSCR3O14972 297 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 CCL16O15467 120 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 PRAMEF10O60809 474 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 KRT75O95678 551 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 CTSLP07711 333 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF45Q02386 682 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 EEF1A2Q05639 463 aaKnown RBP17.92■□□□□ 0.46
CPSF3-201ENST00000238112 FOXD4Q12950 439 aaPredicted RBP17.92■□□□□ 0.46
CPSF3-201ENST00000238112 GANABQ14697 944 aaKnown RBP17.92■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF805Q5CZA5 627 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 STEAP3Q658P3 488 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 TMEM215Q68D42 235 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF367Q7RTV3 350 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms