RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 A8MVJ9 347 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 PTGES3LE9PB15 166 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 TMX2-CTNND1H3BSU7 103 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 IL3P08700 152 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 PCBP3P57721 371 aaKnown RBP15.46■□□□□ 0.07
UBE3D-201ENST00000237186 TAS2R38P59533 333 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 EMX1Q04741 257 aaPredicted RBP15.46■□□□□ 0.07
UBE3D-201ENST00000237186 PIGFQ07326 219 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 NPRL3Q12980 569 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 RUNX3Q13761 415 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 ENPP2Q13822 863 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 MAD2L1BPQ15013 274 aaPredicted RBP15.46■□□□□ 0.07
UBE3D-201ENST00000237186 SLC5A12Q1EHB4 618 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 IFI44LQ53G44 452 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 TANGO2Q6ICL3 276 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 ANKRD13BQ86YJ7 626 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 LZICQ8WZA0 190 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 AIF1LQ9BQI0 150 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 TEX101Q9BY14 249 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 SLC6A16Q9GZN6 736 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 EXD2Q9NVH0 621 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 SCN3BQ9NY72 215 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 LYVE1Q9Y5Y7 322 aa15.46■□□□□ 0.07
UBE3D-201ENST00000237186 IGLON5A6NGN9 336 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 ZNF99A8MXY4 864 aaPredicted RBP15.46■□□□□ 0.06
UBE3D-201ENST00000237186 XPNPEP2O43895 674 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 INHBBP09529 407 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 ARAFP10398 606 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 DDCP20711 480 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 UQCRC2P22695 453 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 AQP1P29972 269 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 CD6P30203 668 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 RRM2P31350 389 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 PRIM2P49643 509 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 CSNK2BP67870 215 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 CDK6Q00534 326 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 NPTX1Q15818 432 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 PROX2Q3B8N5 592 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 AGBL4Q5VU57 503 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 KHDRBS2Q5VWX1 349 aaKnown RBP15.46■□□□□ 0.06
UBE3D-201ENST00000237186 VITQ6UXI7 678 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 FAR1Q8WVX9 515 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 TANKQ92844 425 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 TAMM41Q96BW9 452 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 ZNF764Q96H86 408 aaPredicted RBP15.46■□□□□ 0.06
UBE3D-201ENST00000237186 HRASLS5Q96KN8 279 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 CSF3RQ99062 836 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 LGR4Q9BXB1 951 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 MS4A8Q9BY19 250 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 RUBCNLQ9H714 662 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 TAAR2Q9P1P5 351 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 KIF17Q9P2E2 1029 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 ACSL5Q9ULC5 683 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 PLAGL1Q9UM63 463 aa15.46■□□□□ 0.06
UBE3D-201ENST00000237186 TCF20Q9UGU0 1960 aaKnown RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 PLPP1O14494 284 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 KMOO15229 486 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 KAT7O95251 611 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 IFNA14P01570 189 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 CYP4B1P13584 511 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 ITGA2P17301 1181 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 CD247P20963 164 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 EPHA2P29317 976 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 BSGP35613 385 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 TRIM23P36406 574 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 GSTM5P46439 218 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 ENTPD1P49961 510 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 GP2P55259 537 aaKnown RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 RPP38P78345 283 aaKnown RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 DMPKQ09013 629 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 LAIR1Q6GTX8 287 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 RNF130Q86XS8 419 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 CCDC71Q8IV32 467 aaPredicted RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 OR4C15Q8NGM1 316 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 SPPL2AQ8TCT8 520 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 SMPDL3AQ92484 453 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 TM4SF18Q96CE8 201 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 ZNF300Q96RE9 604 aaPredicted RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 FUNDC2Q9BWH2 189 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 RSPH9Q9H1X1 276 aaPredicted RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 ENPP5Q9UJA9 477 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 TDRKHQ9Y2W6 561 aaKnown RBP15.45■□□□□ 0.06
UBE3D-201ENST00000237186 PCM1Q15154 2024 aa15.45■□□□□ 0.06
UBE3D-201ENST00000237186 LRRK1Q38SD2 2015 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 NUP214P35658 2090 aaPredicted RBP15.44■□□□□ 0.06
UBE3D-201ENST00000237186 A0A1W2PPV9 198 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 ANKDD1BA6NHY2 528 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 TNFRSF11BO00300 401 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 NDUFS2O75306 463 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 PCCBP05166 539 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 CCR8P51685 355 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 HMGA2P52926 109 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 REEP5Q00765 189 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 IL1RL1Q01638 556 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 SHHQ15465 462 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 CST6Q15828 149 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 MOGQ16653 247 aa15.44■□□□□ 0.06
UBE3D-201ENST00000237186 ZNF829Q3KNS6 432 aaPredicted RBP15.44■□□□□ 0.06
UBE3D-201ENST00000237186 SYT6Q5T7P8 510 aaPredicted RBP15.44■□□□□ 0.06
UBE3D-201ENST00000237186 EGFLAMQ63HQ2 1017 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms