RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 METTL2BQ6P1Q9 378 aaKnown RBP12.93□□□□□ -0.34
VEGFA-201ENST00000230480 KLC3Q6P597 504 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 TAOK1Q7L7X3 1001 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 PTRH1Q86Y79 214 aaKnown RBP12.93□□□□□ -0.34
VEGFA-201ENST00000230480 IQCKQ8N0W5 287 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 KRT78Q8N1N4 520 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 RBMXL3Q8N7X1 1067 aaKnown RBP12.93□□□□□ -0.34
VEGFA-201ENST00000230480 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 OR2L5Q8NG80 312 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 HUS1BQ8NHY5 278 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 GAL3ST3Q96A11 431 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 SEC16BQ96JE7 1060 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 SCYL1Q96KG9 808 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 SMAD5Q99717 465 aaKnown RBP12.93□□□□□ -0.34
VEGFA-201ENST00000230480 ARHGAP9Q9BRR9 750 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 TMEM109Q9BVC6 243 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 OR51B5Q9H339 312 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 TNFRSF12AQ9NP84 129 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 NECTIN3Q9NQS3 549 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 C14orf105Q9NVL8 296 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 LGALS13Q9UHV8 139 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 MKL2Q9ULH7 1088 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 MAGEB17A8MXT2 336 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 B8ZZF3 427 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 UBFD1O14562 309 aaKnown RBP12.92□□□□□ -0.34
VEGFA-201ENST00000230480 ERI3O43414 337 aaKnown RBP12.92□□□□□ -0.34
VEGFA-201ENST00000230480 SUV39H1O43463 412 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 PLIN3O60664 434 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 SCELO95171 688 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 TGFB1P01137 390 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 PRKAA2P54646 552 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 RGS1Q08116 209 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 LAPTM5Q13571 262 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 RAPSNQ13702 412 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 LIPJQ5W064 366 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 LETMD1Q6P1Q0 360 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 MED27Q6P2C8 311 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 ANKRD37Q7Z713 158 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 ZNF605Q86T29 641 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 TRABD2AQ86V40 505 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 PARP9Q8IXQ6 854 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 GALNT16Q8N428 558 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 Q8NA96 180 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 C9orf43Q8TAL5 461 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-201ENST00000230480 UCN3Q969E3 161 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 IP6K3Q96PC2 410 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 CSF3RQ99062 836 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 NPAS2Q99743 824 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 YIPF2Q9BWQ6 316 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 ZNF700Q9H0M5 742 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 GSTO2Q9H4Y5 243 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 SEMA4BQ9NPR2 832 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-201ENST00000230480 DMRT3Q9NQL9 472 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 FARSBQ9NSD9 589 aaKnown RBP12.92□□□□□ -0.34
VEGFA-201ENST00000230480 TNPO3Q9Y5L0 923 aaKnown RBP12.92□□□□□ -0.34
VEGFA-201ENST00000230480 CSAG2Q9Y5P2 127 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 MYO18BQ8IUG5 2567 aa12.92□□□□□ -0.34
VEGFA-201ENST00000230480 CCDC151A5D8V7 595 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 WASHC1A8K0Z3 465 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 PRPF4O43172 522 aaKnown RBP eCLIP12.91□□□□□ -0.345e-8■■■□□ 16
VEGFA-201ENST00000230480 UGDHO60701 494 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 CDC123O75794 336 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 HPP00738 406 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 IGHEP01854 428 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 TUBBP07437 444 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 FHP07954 510 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 GSTA1P08263 222 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 IMPDH1P20839 514 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 ATP5A1P25705 553 aaKnown RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 CERS1P27544 350 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 GSTM2P28161 218 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 CRHR1P34998 444 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 BSGP35613 385 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 PLA2G16P53816 162 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 RPS13P62277 151 aaKnown RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 EEF1A2Q05639 463 aaKnown RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 MYBPC3Q14896 1274 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 ZRSR2Q15696 482 aaKnown RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 RBBP7Q16576 425 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 CPSF6Q16630 551 aaKnown RBP eCLIP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 TCHHL1Q5QJ38 904 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 IGFL2Q6UWQ7 119 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 SCUBE1Q8IWY4 988 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 C4orf33Q8N1A6 199 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 BANPQ8N9N5 519 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 TTLQ8NG68 377 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 OR4F6Q8NGB9 312 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 TBC1D20Q96BZ9 403 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 L3HYPDHQ96EM0 354 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 MTERF1Q99551 399 aaKnown RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 SLC25A23Q9BV35 468 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
VEGFA-201ENST00000230480 ZNF160Q9HCG1 818 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 DCDC2Q9UHG0 476 aa12.91□□□□□ -0.34
VEGFA-201ENST00000230480 ANKDD1BA6NHY2 528 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 SAP18O00422 153 aaKnown RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 PLPP1O14494 284 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms