RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MTRF1LQ9UGC7 380 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 DMGDHQ9UI17 866 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 ERRFI1Q9UJM3 462 aaPredicted RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 ZNF490Q9ULM2 529 aaPredicted RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 ACOT9Q9Y305 439 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ANKRD12Q6UB98 2062 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 KERAO60938 352 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 CLEC3AO75596 197 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 TBX6O95947 436 aaPredicted RBP13.35□□□□□ -0.27
GPN3-201ENST00000228827 GP1BBP13224 206 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 GSTM2P28161 218 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 PHBP35232 272 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 CHIT1Q13231 466 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 HIST2H2BCQ6DN03 193 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 H3F3CQ6NXT2 135 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 LRRC70Q7Z2Q7 622 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 CENPLQ8N0S6 344 aaPredicted RBP13.35□□□□□ -0.27
GPN3-201ENST00000228827 KIF2BQ8N4N8 673 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 TAAR6Q96RI8 345 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 EFCAB11Q9BUY7 163 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 PITHD1Q9GZP4 211 aaPredicted RBP13.35□□□□□ -0.27
GPN3-201ENST00000228827 REXO4Q9GZR2 422 aaKnown RBP13.35□□□□□ -0.27
GPN3-201ENST00000228827 RNF32Q9H0A6 362 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 EHD1Q9H4M9 534 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 CLK4Q9HAZ1 481 aaKnown RBP13.35□□□□□ -0.27
GPN3-201ENST00000228827 PRDM9Q9NQV7 894 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 SNX15Q9NRS6 342 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 COPG2Q9UBF2 871 aa13.35□□□□□ -0.27
GPN3-201ENST00000228827 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 A0A087X1B8 175 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 A1L4Q6 167 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 HMX2A2RU54 273 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 B3GALT2O43825 422 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 PRAMEF2O60811 474 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 SH3BGRLO75368 114 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 ACSL3O95573 720 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 C2P06681 752 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 PCNAP12004 261 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 CERS1P27544 350 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 MSH2P43246 934 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 TAS2R50P59544 299 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 PMP22Q01453 160 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 TUBA3CQ13748 450 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 HIST2H2ACQ16777 129 aaPredicted RBP13.34□□□□□ -0.27
GPN3-201ENST00000228827 MEP1AQ16819 746 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 HIST2H2AA3Q6FI13 130 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 TRIM40Q6P9F5 258 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 TUBA3EQ6PEY2 450 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 SLC5A8Q8N695 610 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 ARMC2Q8NEN0 867 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 OR2L5Q8NG80 312 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 WDR34Q96EX3 536 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 SIGLEC12Q96PQ1 595 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 F2RL3Q96RI0 385 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 CDCP1Q9H5V8 836 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 COPS7BQ9H9Q2 264 aaPredicted RBP13.34□□□□□ -0.27
GPN3-201ENST00000228827 ABI3Q9P2A4 366 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 OPTCQ9UBM4 332 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 OSGIN2Q9Y236 505 aa13.34□□□□□ -0.27
GPN3-201ENST00000228827 SHANK1Q9Y566 2161 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 A0A088AWK7 358 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 A0A096LPK6 155 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 IGKV3D-11A0A0A0MRZ8 115 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 TCRBV16S1A1N1A0A5B0 115 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 SAGE2PA6NJ88 616 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 GABRR3A8MPY1 467 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 K7EPI3 171 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 RASAL1O95294 804 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 CTAGE8P0CG41 777 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 EDN3P14138 238 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 ZNF10P21506 573 aaPredicted RBP13.33□□□□□ -0.28
GPN3-201ENST00000228827 HNRNPFP52597 415 aaKnown RBP13.33□□□□□ -0.28
GPN3-201ENST00000228827 RAB38P57729 211 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 LAPTM5Q13571 262 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 FAM83EQ2M2I3 478 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 ADPRMQ3LIE5 342 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 ZNF766Q5HY98 468 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 PAGE2BQ5JRK9 111 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 ABHD17CQ6PCB6 329 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 CLNKQ7Z7G1 428 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 CTAGE4Q8IX94 777 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 TMEM52Q8NDY8 209 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 UHMK1Q8TAS1 419 aaKnown RBP13.33□□□□□ -0.28
GPN3-201ENST00000228827 ELP5Q8TE02 316 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 UBTD2Q8WUN7 234 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 QRFPRQ96P65 431 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 SLX1AQ9BQ83 275 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 UTP23Q9BRU9 249 aaKnown RBP13.33□□□□□ -0.28
GPN3-201ENST00000228827 HES7Q9BYE0 225 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 VPS11Q9H270 941 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 CDC42EP4Q9H3Q1 356 aaKnown RBP13.33□□□□□ -0.28
GPN3-201ENST00000228827 KLHL1Q9NR64 748 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.28
GPN3-201ENST00000228827 SLC5A6Q9Y289 635 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 ANGPTL3Q9Y5C1 460 aa13.33□□□□□ -0.28
GPN3-201ENST00000228827 MYOCOSA0A1B0GUC4 107 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms