RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 NDC1Q9BTX1 674 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 PITPNM3Q9BZ71 974 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 PPANQ9NQ55 473 aaKnown RBP5.44□□□□□ -1.54
AFP-201ENST00000226359 LHX9Q9NQ69 397 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 MARCH4Q9P2E8 410 aaPredicted RBP5.44□□□□□ -1.54
AFP-201ENST00000226359 ITGB1BP2Q9UKP3 347 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 SNX7Q9UNH6 387 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 PLCL2Q9UPR0 1127 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 MAN2B2Q9Y2E5 1009 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 ADAMTS20P59510 1910 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 MYLKQ15746 1914 aa5.44□□□□□ -1.54
AFP-201ENST00000226359 TCRBV7S3A2A0A539 114 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 H3BUI4 141 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ACOT7O00154 380 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 BTN3A3O00478 584 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 SHOX2O60902 331 aaPredicted RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 CDH16O75309 829 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 GPC4O75487 556 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 TMEM63AO94886 807 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 SLCO2B1O94956 709 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CNOT4O95628 575 aaKnown RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 NTRK1P04629 796 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 RAB40ALP0C0E4 278 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CBSLP0DN79 551 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ST6GAL1P15907 406 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ACADLP28330 430 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 PTPN4P29074 926 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 SLC7A1P30825 629 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CBSP35520 551 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 BDKRB1P46663 353 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ARSFP54793 590 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 POLE2P56282 527 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 EGR3Q06889 387 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 DAG1Q14118 895 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 KLHL38Q2WGJ6 581 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ZNF658BQ4V348 819 aaPredicted RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 TCTE1Q5JU00 501 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 STEAP3Q658P3 488 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CNSTQ6PJW8 725 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 NAPRTQ6XQN6 538 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 KIAA0408Q6ZU52 694 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 NEK10Q6ZWH5 1172 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 TRIM73Q86UV7 250 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 TAX1BP1Q86VP1 789 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 WFDC3Q8IUB2 231 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ADGRF3Q8IZF5 1079 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 UNC5BQ8IZJ1 945 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 HIPK4Q8NE63 616 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 THAP4Q8WY91 577 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 SMPDL3AQ92484 453 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 LPGAT1Q92604 370 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 ZNF501Q96CX3 271 aaPredicted RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 LRRC39Q96DD0 335 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CFAP36Q96G28 342 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 SLC35A4Q96G79 324 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 IP6K3Q96PC2 410 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 EBNA1BP2Q99848 306 aaKnown RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 NLNQ9BYT8 704 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CHRNA10Q9GZZ6 450 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 P2RY12Q9H244 342 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CNTD2Q9H8S5 307 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 KCNK9Q9NPC2 374 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 OBP2BQ9NPH6 170 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 FBXO6Q9NRD1 293 aaPredicted RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 NSMCE4AQ9NXX6 385 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CORO1CQ9ULV4 474 aaPredicted RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 PLAGL1Q9UM63 463 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 FARSAQ9Y285 508 aaKnown RBP5.43□□□□□ -1.54
AFP-201ENST00000226359 SCN8AQ9UQD0 1980 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 CACNA1GO43497 2377 aa5.43□□□□□ -1.54
AFP-201ENST00000226359 IQCF5A8MTL0 148 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 E7ESA3 106 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 GOLGA8TH3BQL2 631 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 PEX12O00623 359 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 ZSCAN9O15535 394 aaPredicted RBP5.42□□□□□ -1.54
AFP-201ENST00000226359 PHGDHO43175 533 aaKnown RBP5.42□□□□□ -1.54
AFP-201ENST00000226359 FRS3O43559 492 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 ZBTB14O43829 449 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 SLC28A2O43868 658 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 NIPSNAP2O75323 286 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 AVILO75366 819 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 CREG1O75629 220 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 MPC1LP0DKB6 136 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 ITGAXP20702 1163 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 CD9P21926 228 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 TACR1P25103 407 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 FOLR3P41439 243 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 ELK3P41970 407 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 SLC1A2P43004 574 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 MSH2P43246 934 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 SLC12A2P55011 1212 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 RRADP55042 308 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 TEKQ02763 1124 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 NFATC3Q12968 1075 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 SRSF6Q13247 344 aaKnown RBP5.42□□□□□ -1.54
AFP-201ENST00000226359 LY6DQ14210 128 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 SEMA3AQ14563 771 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 CRYMQ14894 314 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 ARHGAP19Q14CB8 494 aa5.42□□□□□ -1.54
AFP-201ENST00000226359 FASTKD3Q14CZ7 662 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms