RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ARAFP10398 606 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 HLA-EP13747 358 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 CHI3L1P36222 383 aaPredicted RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 OPRL1P41146 370 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 CYP2A13Q16696 494 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 FNDC3BQ53EP0 1204 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ZNF852Q6ZMS4 543 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 CCDC81Q6ZN84 652 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 TRIM74Q86UV6 250 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ARMC8Q8IUR7 673 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ETFBKMTQ8IXQ9 262 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 NFKBIDQ8NI38 313 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 PHF10Q8WUB8 498 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 FEVQ99581 238 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 MYOCQ99972 504 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 AKIP1Q9NQ31 210 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 AASSQ9UDR5 926 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 DPP7Q9UHL4 492 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 MRPS23Q9Y3D9 190 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 TESMINQ9Y4I5 508 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 CORINQ9Y5Q5 1042 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 SEMA3DO95025 777 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 FADS2O95864 444 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 OCM2P0CE71 109 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 OCMP0CE72 109 aaPredicted RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ADRB3P13945 408 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 EPCAMP16422 314 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 UQCRC2P22695 453 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 SERPINB1P30740 379 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 HSD17B2P37059 387 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ELAVL3Q14576 367 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 EIF4HQ15056 248 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 SMN1Q16637 294 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ADPRMQ3LIE5 342 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 DUS1LQ6P1R4 473 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 TMIGD1Q6UXZ0 262 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 C12orf40Q86WS4 652 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ZNF547Q8IVP9 402 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 CENPSQ8N2Z9 138 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 ING5Q8WYH8 240 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 PELI2Q9HAT8 420 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 FBXO8Q9NRD0 319 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 RASSF1Q9NS23 344 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 DNAAF2Q9NVR5 837 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 PSORS1C1Q9UIG5 152 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 J3QRK9 145 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 K7ESM1 405 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 KLK1P06870 262 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 FSHRP23945 695 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 HMGA2P52926 109 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 PCBP3P57721 371 aaKnown RBP21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 MC1RQ01726 317 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 SPIBQ01892 262 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 ARHGAP19Q14CB8 494 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 MPEG1Q2M385 716 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 PDZD3Q86UT5 571 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 IGFN1Q86VF2 1251 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 SLC5A8Q8N695 610 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 TMCO5AQ8N6Q1 288 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 DENND6BQ8NEG7 585 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 RHOXF1Q8NHV9 184 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 CIDECQ96AQ7 238 aaPredicted RBP21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 PAWRQ96IZ0 340 aaKnown RBP21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 LRRC3BQ96PB8 259 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 OR52A5Q9H2C5 316 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 RHBGQ9H310 441 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 FKBP14Q9NWM8 211 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 RWDD3Q9Y3V2 267 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 DENND4AQ7Z401 1863 aa21.03■□□□□ 0.96
SMARCD2-201ENST00000225742 ARRDC5A6NEK1 342 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 NFATC1O95644 943 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 NR4A1P22736 598 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 CXCR2P25025 360 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 KCNC4Q03721 635 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 TCEAL5Q5H9L2 206 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 AHSA2Q719I0 299 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 SLC9B2Q86UD5 537 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 RNF130Q86XS8 419 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 DCUN1D3Q8IWE4 304 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 DYNC2LI1Q8TCX1 351 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 DNASE1L2Q92874 299 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 SLC38A4Q969I6 547 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 NXPE3Q969Y0 559 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 KCNC2Q96PR1 638 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 PIP5K1AQ99755 562 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 COPS4Q9BT78 406 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 DYRK4Q9NR20 520 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 PCDHGA2Q9Y5H1 932 aa21.02■□□□□ 0.96
SMARCD2-201ENST00000225742 MUC22E2RYF6 1773 aaPredicted RBP21.02■□□□□ 0.95
SMARCD2-201ENST00000225742 MMP20O60882 483 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 RPN2P04844 631 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 HNRNPCP07910 306 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 TFPTP0C1Z6 253 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 XCR1P46094 333 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 TBCEQ15813 527 aaPredicted RBP21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 GPR153Q6NV75 609 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 ADAMTSL4Q6UY14 1074 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 ERN2Q76MJ5 926 aaKnown RBP21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 FAM129CQ86XR2 697 aa21.01■□□□□ 0.95
SMARCD2-201ENST00000225742 LGI4Q8N135 537 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms