RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 TADA1Q96BN2 335 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 C1orf74Q96LT6 269 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 ZSCAN5AQ9BUG6 496 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 C1QTNF6Q9BXI9 259 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 RACGAP1Q9H0H5 632 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 RNF121Q9H920 327 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 SSR3Q9UNL2 185 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 CMAHPQ9Y471 501 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 ALG5Q9Y673 324 aa13.77□□□□□ -0.2
SFXN3-201ENST00000224807 CSF3P09919 207 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 ITGA2P17301 1181 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 EPORP19235 508 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 OLR1P78380 273 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 SPHARQ15513 63 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 SNAPC1Q16533 368 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 ATAT1Q5SQI0 421 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 KRT74Q7RTS7 529 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 FAM20CQ8IXL6 584 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 ZNF683Q8IZ20 524 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 GATAD2BQ8WXI9 593 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 WBP2Q969T9 261 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 ARPC5LQ9BPX5 153 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 C1QTNF3Q9BXJ4 246 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 PPIL3Q9H2H8 161 aaKnown RBP13.77□□□□□ -0.21
SFXN3-201ENST00000224807 NDRG2Q9UN36 371 aaKnown RBP13.77□□□□□ -0.21
SFXN3-201ENST00000224807 MRPS7Q9Y2R9 242 aaKnown RBP13.77□□□□□ -0.21
SFXN3-201ENST00000224807 ANKRD36A6QL64 1941 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 WASH4PA8MWX3 477 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 CASKO14936 926 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 C6orf47O95873 294 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 EBLN1P0CF75 366 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.21
SFXN3-201ENST00000224807 POLR2EP19388 210 aaKnown RBP13.77□□□□□ -0.21
SFXN3-201ENST00000224807 CRYBA2P53672 197 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.211e-7■■■□□ 16.7
SFXN3-201ENST00000224807 TUSC3Q13454 348 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 FRG2Q64ET8 278 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 GDF6Q6KF10 455 aaPredicted RBP13.77□□□□□ -0.21
SFXN3-201ENST00000224807 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 HCAR2Q8TDS4 363 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 RAB8BQ92930 207 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 OPALINQ96PE5 141 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 FRG2BQ96QU4 278 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 FAM83DQ9H4H8 585 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 FBXO44Q9H4M3 255 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 HHATLQ9HCP6 504 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 ZNF224Q9NZL3 707 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 C5AR2Q9P296 337 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 IL20RAQ9UHF4 553 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 SLC23A1Q9UHI7 598 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 V9GYH0 126 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 C5orf42Q9H799 3197 aa13.77□□□□□ -0.21
SFXN3-201ENST00000224807 MYO7AQ13402 2215 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 SMAD6O43541 496 aaKnown RBP13.76□□□□□ -0.21
SFXN3-201ENST00000224807 PRAMEF4O60810 478 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 ZNF780AO75290 641 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-201ENST00000224807 CH25HO95992 272 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 EPOP01588 193 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 DDOSTP39656 456 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 MAGEA11P43364 429 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 AVPR1BP47901 424 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 CHRNEQ04844 493 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 FAPQ12884 760 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 ZXDCQ2QGD7 858 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-201ENST00000224807 PRAMEF9Q5VWM5 478 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 IL20RBQ6UXL0 311 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 RNF130Q86XS8 419 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 RBFAQ8N0V3 343 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 MMP21Q8N119 569 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 LRRC20Q8TCA0 184 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 C7orf34Q96L11 122 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 MGME1Q9BQP7 344 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 DOHHQ9BU89 302 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 TMED9Q9BVK6 235 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 PRAMEF33A0A0G2JMD5 474 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 GABRR3A8MPY1 467 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 SEPT4O43236 478 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 PRAMEF10O60809 474 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 GSTM1P09488 218 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 CHMP24386 653 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 EVI2BP34910 448 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 CSNK1DP48730 415 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 ALDH9A1P49189 494 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-201ENST00000224807 HYAL2Q12891 473 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 NAE1Q13564 534 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 PDZD3Q86UT5 571 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 Q8N402 240 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 DNAJC5GQ8N7S2 189 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 C11orf65Q8NCR3 313 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 MKRN2Q9H000 416 aaKnown RBP13.76□□□□□ -0.21
SFXN3-201ENST00000224807 IL17CQ9P0M4 197 aa13.76□□□□□ -0.21
SFXN3-201ENST00000224807 SATB2Q9UPW6 733 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms