RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TRPV3Q8NET8 790 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 DIRAS2Q96HU8 199 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 NDC1Q9BTX1 674 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 PDCD10Q9BUL8 212 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 HDAC8Q9BY41 377 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 NEK6Q9HC98 313 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 ZNF860A6NHJ4 632 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 CASKO14936 926 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 SLC16A5O15375 505 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 ATF4P18848 351 aaPredicted RBP9.06□□□□□ -0.96
CCDC113-201ENST00000219299 PSMA1P25786 263 aaKnown RBP9.06□□□□□ -0.96
CCDC113-201ENST00000219299 C18orf21Q32NC0 220 aaPredicted RBP9.06□□□□□ -0.96
CCDC113-201ENST00000219299 AFMIDQ63HM1 303 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 MEIOBQ8N635 442 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 ENDOVQ8N8Q3 282 aaKnown RBP9.06□□□□□ -0.96
CCDC113-201ENST00000219299 PTERQ96BW5 349 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 ZDHHC12Q96GR4 267 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 C17orf62Q9BQA9 187 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 PHF11Q9UIL8 331 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 RLFQ13129 1914 aa9.06□□□□□ -0.96
CCDC113-201ENST00000219299 CACNA1HO95180 2353 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ARHGEF33A8MVX0 844 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ZNF99A8MXY4 864 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC22A1O15245 554 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PRKD3O94806 890 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 HIST1H2ABP04908 130 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 C1GALT1C1LP0DN25 315 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC6A2P23975 617 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 GABRB3P28472 473 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 DUSP3P51452 185 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PGDP52209 483 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ZXDBP98169 803 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 DOC2AQ14183 400 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 NFATC4Q14934 902 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 UNC50Q53HI1 259 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TMPRSS11AQ6ZMR5 421 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 HIST3H2AQ7L7L0 130 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 UBALD2Q8IYN6 164 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PACRGLQ8N7B6 248 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 HIST1H2ACQ93077 130 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 RSPRY1Q96DX4 576 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 GPN1Q9HCN4 374 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ADAP2Q9NPF8 381 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SERTAD3Q9UJW9 196 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC9A8Q9Y2E8 581 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 MAP4K5Q9Y4K4 846 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PRSS38A1L453 326 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 NOTOA8MTQ0 251 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ZNF829Q3KNS6 432 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 NCCRP1Q6ZVX7 275 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SMRP1Q8NCR6 262 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 FCGR1BQ92637 280 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC12A9Q9BXP2 914 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC29A3Q9BZD2 475 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TTYH1Q9H313 450 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TRPV5Q9NQA5 729 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 MUTYHQ9UIF7 546 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 FAM149AA5PLN7 773 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TMEM150CB9EJG8 249 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 H3BNH8 94 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 M0QX08 132 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC28A2O43868 658 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 B4GALT2O60909 372 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 KHDRBS3O75525 346 aaKnown RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 MTRF1O75570 445 aaKnown RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ADPRHP54922 357 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 VSX2P58304 361 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 LIPEQ05469 1076 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 KCNC3Q14003 757 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 KIAA1211LQ6NV74 962 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ERICH5Q6P6B1 374 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PEG10Q86TG7 708 aaKnown RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC34A3Q8N130 599 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 OR52L1Q8NGH7 329 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 EDAQ92838 391 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TEFMQ96QE5 360 aaKnown RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 C6orf106Q9H6K1 298 aaPredicted RBP9.05□□□□□ -0.96
CCDC113-201ENST00000219299 CDC14AQ9UNH5 594 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 KLF11O14901 512 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 KCNJ13O60928 360 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 PRG2P13727 222 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 SLC7A1P30825 629 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 CTSKP43235 329 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 OR2B6P58173 313 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 GSTM4Q03013 218 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 RPA4Q13156 261 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 MOGQ16653 247 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TOR1AIP1Q5JTV8 583 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 TSSK4Q6SA08 328 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ZNF248Q8NDW4 579 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 GAL3ST4Q96RP7 486 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 ZNF382Q96SR6 550 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 DUSP26Q9BV47 211 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 LYVE1Q9Y5Y7 322 aa9.05□□□□□ -0.96
CCDC113-201ENST00000219299 CHURC1-FNTBB4DL54 471 aa9.04□□□□□ -0.96
CCDC113-201ENST00000219299 H0Y8X5 98 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms