RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZW10O43264 779 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZNF26P17031 533 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SLC7A1P30825 629 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FNTBP49356 437 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 HNRNPFP52597 415 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PLA2G16P53816 162 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 HNRNPKP61978 463 aaKnown RBP eCLIP18.76■□□□□ 0.597e-7■■■□□ 16.2
TNFRSF1A-201ENST00000162749 C2orf80Q0P641 193 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 DUOXA1Q1HG43 343 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 WDR45BQ5MNZ6 344 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 IKBIPQ70UQ0 350 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RBM12BQ8IXT5 1001 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MFSD9Q8NBP5 474 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 GBP5Q96PP8 586 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 C17orf62Q9BQA9 187 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 THUMPD3Q9BV44 507 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 KLHL31Q9H511 634 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SPASTQ9UBP0 616 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RAB26Q9ULW5 256 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PCDHGB4Q9UN71 923 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PCDHGB5Q9Y5G0 923 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 C2orf74A8MZ97 194 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 C4orf51C9J302 202 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ARPC2O15144 300 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TNFSF14O43557 240 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 EFNA1P20827 205 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TRPC1P48995 793 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MAPK12P53778 367 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MAZP56270 477 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TJAP1Q5JTD0 557 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 LCN8Q6JVE9 175 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SPESP1Q6UW49 350 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 R3HCC1LQ7Z5L2 792 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 GALNT4Q8N4A0 578 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FAM110BQ8TC76 370 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MS4A6EQ96DS6 147 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZNF583Q96ND8 569 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 DDX31Q9H8H2 851 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 DOLKQ9UPQ8 538 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 AP4B1Q9Y6B7 739 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 AK5Q9Y6K8 562 aa18.75■□□□□ 0.59
TNFRSF1A-201ENST00000162749 A0A0G2JN53 185 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ARHGAP10A1A4S6 786 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 AQP9O43315 295 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 HTR1EP28566 365 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SOX11P35716 441 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FASLGP48023 281 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 OR4D2P58180 307 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RPS15AP62244 130 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TMEM35AQ53FP2 167 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 OR4C11Q6IEV9 310 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 HMBOX1Q6NT76 420 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 VN1R4Q7Z5H5 301 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MMP21Q8N119 569 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CCDC115Q96NT0 180 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TEFMQ96QE5 360 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SH3GL1Q99961 368 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CPPED1Q9BRF8 314 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 BHLHE41Q9C0J9 482 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 EVA1BQ9NVM1 165 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 UNC13CQ8NB66 2214 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CTSVO60911 334 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SDC3O75056 442 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 STAMBPO95630 424 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RPL3P39023 403 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CHN2P52757 468 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FCRL6Q6DN72 434 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZNF793Q6ZN11 406 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 AMER3Q8N944 861 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 VPS37AQ8NEZ2 397 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 OR10A6Q8NH74 314 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CANT1Q8WVQ1 401 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RSC1A1Q92681 617 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZUFSPQ96AP4 578 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TM4SF18Q96CE8 201 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MTERF3Q96E29 417 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 QRFPRQ96P65 431 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MUC13Q9H3R2 512 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 KAT8Q9H7Z6 458 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PRMT8Q9NR22 394 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ATAD3AQ9NVI7 634 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ADAM29Q9UKF5 820 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CNOT11Q9UKZ1 510 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SNX13Q9Y5W8 968 aa18.74■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RNASET2O00584 256 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ERI3O43414 337 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TMPRSS11DO60235 418 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TDGF1P13385 188 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 LSSP48449 732 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PPP1CAP62136 330 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MPEG1Q2M385 716 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FBXO42Q6P3S6 717 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZNF438Q7Z4V0 828 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 C10orf111Q8N326 155 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ARL14Q8N4G2 192 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PPCDCQ96CD2 204 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 KLHL25Q9H0H3 589 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MIEF1Q9NQG6 463 aa18.73■□□□□ 0.59
TNFRSF1A-201ENST00000162749 BTNL2Q9UIR0 455 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms