RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GPR160Q9UJ42 338 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 GVINP1Q7Z2Y8 2422 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TTC34A8MYJ7 566 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PSMD10O75832 226 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PFKMP08237 780 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CYP4B1P13584 511 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CNTN2Q02246 1040 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RPL6Q02878 288 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 LRRC32Q14392 662 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 MLC1Q15049 377 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TLR1Q15399 786 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 C19orf35Q6ZS72 473 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 IRF2BP2Q7Z5L9 587 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SRMSQ9H3Y6 488 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TBC1D17Q9HA65 648 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ADAM10O14672 748 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RBBP9O75884 186 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ITGA5P08648 1049 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PTPN2P17706 415 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 XRCC1P18887 633 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 BMP6P22004 513 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 NDUFV1P49821 464 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RAB11BQ15907 218 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CHRFAM7AQ494W8 412 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 AKIRIN2Q53H80 203 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ZCCHC23Q6ZST2 131 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 BBS10Q8TAM1 723 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FNDC8Q8TC99 324 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FAM83CQ9BQN1 747 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PATZ1Q9HBE1 687 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ICKQ9UPZ9 632 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TET1Q8NFU7 2136 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TCRBV5S4A2TA0A5A2 114 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 BCL9O00512 1426 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PEX12O00623 359 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 WNT9AO14904 365 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CAPN5O15484 640 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 GPR137BO60478 399 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PAHP00439 452 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CXCR4P61073 352 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ARF3P61204 181 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ARF1P84077 181 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RAPSNQ13702 412 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 DOK6Q6PKX4 331 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 C5orf46Q6UWT4 87 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CEP68Q76N32 757 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 STON2Q8WXE9 905 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SMPDL3AQ92484 453 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF587Q96SQ5 575 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ADAM2Q99965 735 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RNF6Q9Y252 685 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TP53P04637 393 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CHRNB4P30926 498 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 VIPR1P32241 457 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC6A9P48067 706 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC5A3P53794 718 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC26A5P58743 744 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SMAD3P84022 425 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TMEM69Q5SWH9 247 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OGFRL1Q5TC84 451 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FAM151BQ6UXP7 276 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF704Q6ZNC4 412 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF431Q8TF32 576 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SEMA4DQ92854 862 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 POLR1CO15160 346 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TBX1O43435 398 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FKBP2P26885 142 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ICAM3P32942 547 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SEPHS1P49903 392 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CDH11P55287 796 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 BLOC1S1P78537 153 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FAM110CQ1W6H9 321 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NAPRTQ6XQN6 538 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 LRRTM4Q86VH4 590 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CEP97Q8IW35 865 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GPR151Q8TDV0 419 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SMARCD2Q92925 531 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GLYATL1Q969I3 302 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 MAL2Q969L2 176 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 C1orf74Q96LT6 269 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC35A5Q9BS91 424 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FUZQ9BT04 418 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC5A7Q9GZV3 580 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF700Q9H0M5 742 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TFR2Q9UP52 801 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ERVK-11Q9UQG0 969 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PCDHA2Q9Y5H9 948 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PRR36Q9H6K5 1346 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NWD2Q9ULI1 1742 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FUOMA2VDF0 154 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TMX2-CTNND1H3BSU7 103 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FBP2O00757 339 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CDK14O94921 469 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 IGHEP01854 428 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 UCHL1P09936 223 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 MAOAP21397 527 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 VAMP1P23763 118 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ATP6AP1Q15904 470 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 MANEALQ5VSG8 457 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GARNL3Q5VVW2 1013 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms