RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MMP28Q9H239 520 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 PLSCR3Q9NRY6 295 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 DNAJC27Q9NZQ0 273 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 ZNF221Q9UK13 617 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 WBP11Q9Y2W2 641 aaKnown RBP13.45□□□□□ -0.26
USH1C-201ENST00000005226 MYOFQ9NZM1 2061 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 PRMT3O60678 531 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 FHP07954 510 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 CHMP24386 653 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
USH1C-201ENST00000005226 HTR3AP46098 478 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 POM121L1PQ3SYA9 428 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 FBXO43Q4G163 708 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 LAX1Q8IWV1 398 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 DENND6BQ8NEG7 585 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 WDR48Q8TAF3 677 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 BEX2Q9BXY8 128 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 SUV39H2Q9H5I1 410 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 BTNL2Q9UIR0 455 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 SH2B3Q9UQQ2 575 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 A3GALT2U3KPV4 340 aa13.45□□□□□ -0.26
USH1C-201ENST00000005226 TMEM88BA6NKF7 163 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 NRG2O14511 850 aaPredicted RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 LRRTM2O43300 516 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SGTAO43765 313 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 GUCY1B2O75343 617 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 TNFRSF21O75509 655 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SEMA3DO95025 777 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SLC16A8O95907 504 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 TGFB1P01137 390 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SRCP12931 536 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 RFX2P48378 723 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 RPS26P62854 115 aaKnown RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 DUSP7Q16829 419 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SLC5A12Q1EHB4 618 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 MPEG1Q2M385 716 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 LIPJQ5W064 366 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 THOC7Q6I9Y2 204 aaKnown RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 DPY19L3Q6ZPD9 716 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 LSRQ86X29 649 aaPredicted RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 UBQLNLQ8IYU4 475 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 CMTM8Q8IZV2 173 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 DEPDC4Q8N2C3 294 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 PCSK9Q8NBP7 692 aaKnown RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 OPALINQ96PE5 141 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 TTYH2Q9BSA4 534 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 OR51B5Q9H339 312 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 PNMA8CA0A1B0GUJ8 204 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 ANKRD34BA5PLL1 514 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 RFXAPO00287 272 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 CCRL2O00421 344 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 KPNA5O15131 536 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SOCS5O75159 536 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 GADD45GO95257 159 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 KRT75O95678 551 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SOAT1P35610 550 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 CSNK1DP48730 415 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SPINT3P49223 89 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 RPS26P11Q5JNZ5 115 aaPredicted RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 GCNT6Q5T4J0 391 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 TMC5Q6UXY8 1006 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 Q6ZVL8 140 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SLC34A3Q8N130 599 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 CELF5Q8N6W0 485 aaKnown RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 SORBS1Q9BX66 1292 aaKnown RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 SMURF1Q9HCE7 757 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 HHATLQ9HCP6 504 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 STOX2Q9P2F5 926 aaPredicted RBP13.44□□□□□ -0.26
USH1C-201ENST00000005226 MKLN1Q9UL63 735 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 KLK4Q9Y5K2 254 aa13.44□□□□□ -0.26
USH1C-201ENST00000005226 PLXNB3Q9ULL4 1909 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 IGLV3-16A0A075B6K0 115 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 TRBC2A0A5B9 178 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 NPIPB8E9PQR5 432 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 PRRG1O14668 218 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 HOXC11O43248 304 aaPredicted RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 CCNB2O95067 398 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 PDHA2P29803 388 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 CDK6Q00534 326 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 ELAVL2Q12926 359 aaKnown RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 STARD3Q14849 445 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 FAM214AQ32MH5 1076 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 USP45Q70EL2 814 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 TMPRSS11BQ86T26 416 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 CHTF18Q8WVB6 975 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 OVCA2Q8WZ82 227 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 NEIL2Q969S2 332 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 COQ8BQ96D53 544 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 CRELD1Q96HD1 420 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 NMNAT1Q9HAN9 279 aaPredicted RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 ABCB8Q9NUT2 735 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 STOML2Q9UJZ1 356 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 HCN4Q9Y3Q4 1203 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 TRBV4-1A0A0J9YWV2 114 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 DPM1O60762 260 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 MPC1LP0DKB6 136 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms