RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 FCHO2Q0JRZ9 810 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 BNIP1Q12981 228 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 KLF1Q13351 362 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 KIR2DS5Q14953 304 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 HNRNPA1L2Q32P51 320 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 LIN52Q52LA3 116 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 VASNQ6EMK4 673 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CRTC1Q6UUV9 634 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 LRRTM3Q86VH5 581 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 TMEM25Q86YD3 366 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ZDHHC21Q8IVQ6 265 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ZCCHC7Q8N3Z6 543 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 CEP76Q8TAP6 659 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 EFHD2Q96C19 240 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 NMUR2Q9GZQ4 415 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ADAP2Q9NPF8 381 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 GFOD1Q9NXC2 390 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 SMPD3Q9NY59 655 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 DKK3Q9UBP4 350 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 IKZF2Q9UKS7 526 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 PHIPQ8WWQ0 1821 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 LAMB1P07942 1786 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 LAMB2P55268 1798 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 UBE2QL1A1L167 161 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CXorf49A8MYA2 514 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 ZBTB42B2RXF5 422 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 TNFRSF10BO14763 440 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ICMTO60725 284 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 RNH1P13489 461 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 GKP32189 559 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 HMGCLP35914 325 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 OR4D2P58180 307 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 RASGEF1BQ0VAM2 473 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ZNF234Q14588 700 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 GRM7Q14831 915 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 MYBPC3Q14896 1274 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 RBM20Q5T481 1227 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 OR4C11Q6IEV9 310 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 OR52E8Q6IFG1 317 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 PIM3Q86V86 326 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ZFAND4Q86XD8 727 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 NPAS3Q8IXF0 933 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 IZUMO1Q8IYV9 350 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CSNK1A1LQ8N752 337 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 GNPDA2Q8TDQ7 276 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ZBTB8AQ96BR9 441 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 TGM7Q96PF1 710 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CDK15Q96Q40 435 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 HOXD1Q9GZZ0 328 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 TTYH1Q9H313 450 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 PLEKHA1Q9HB21 404 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ALKBH4Q9NXW9 302 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 NKIRAS2Q9NYR9 191 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 DNMT3BQ9UBC3 853 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 RSL24D1Q9UHA3 163 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 RNF11Q9Y3C5 154 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CFAP20Q9Y6A4 193 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 ARAP2Q8WZ64 1704 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 HYKKA2RU49 373 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 H3BNC9 293 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CLIC1O00299 241 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 EMC8O43402 210 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 SHOX2O60902 331 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 TIPRLO75663 272 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 SEC24AO95486 1093 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 PAK4O96013 591 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 TYRP1P17643 537 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 AQP1P29972 269 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 SDC2P34741 201 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 PTDSS1P48651 473 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 RPS3AP61247 264 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 VBP1P61758 197 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CREB5Q02930 508 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ST3GAL3Q11203 375 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CBFBQ13951 182 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 NPTX1Q15818 432 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 FAM189A2Q15884 450 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 VWA5B1Q5TIE3 1220 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 FIP1L1Q6UN15 594 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 B3GNT6Q6ZMB0 384 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.09□□□□□ -1.75
CFTR-201ENST00000003084 MFSD4AQ8N468 514 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 PDPRQ8NCN5 879 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 SHKBP1Q8TBC3 707 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 NEK7Q8TDX7 302 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 FGF13Q92913 245 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 ELSPBP1Q96BH3 223 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 MMABQ96EY8 250 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 LENG8Q96PV6 779 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 SERINC2Q96SA4 455 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 GPER1Q99527 375 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 NAA11Q9BSU3 229 aaPredicted RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 LGR4Q9BXB1 951 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.09□□□□□ -1.75
CFTR-201ENST00000003084 MRPL39Q9NYK5 338 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 POFUT2Q9Y2G5 429 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 RPL36Q9Y3U8 105 aaKnown RBP4.09□□□□□ -1.75
CFTR-201ENST00000003084 USP3Q9Y6I4 520 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 AK5Q9Y6K8 562 aa4.09□□□□□ -1.75
CFTR-201ENST00000003084 CHD4Q14839 1912 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms