RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Vmn2r21K7N6Y7 853 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Vmn2r20L7N2B1 853 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 F2P19221 618 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Acsl1P41216 699 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 SiaeP70665 541 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Casp7P97864 303 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Phf12Q5SPL2 1003 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Pan3Q640Q5 837 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Znf182Q6P560 627 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Slc34a3Q80SU6 601 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Lrrtm4Q80XG9 590 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfm2Q8BM13 448 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Edem1Q925U4 652 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 MtapQ9CQ65 283 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Arl2Q9D0J4 184 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gtf2e2Q9D902 292 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 P33monoxQ9DBN4 303 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Slco1c1Q9ERB5 715 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Grb14Q9JLM9 538 aa9.53□□□□□ -0.88
Syne1-201ENSMUST00000041639 Vmn2r111K7N674 857 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Sult2b1O35400 338 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Tuba3aP05214 450 aaKnown RBP9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 StacP97306 403 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 SirpaP97797 513 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 UradQ283N4 178 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Lmf1Q3U3R4 574 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Vamp1Q62442 118 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Ckmt2Q6P8J7 419 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr1231Q7TQZ8 313 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Lmo3Q8BZL8 145 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 H2-Q4Q8HWB2 354 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cnppd1Q8K158 407 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr692Q8VF03 329 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr599Q8VG01 315 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gnpda2Q9CRC9 276 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Myh15E9Q264 1925 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Nfat5Q9WV30 1534 aa9.52□□□□□ -0.88
Syne1-201ENSMUST00000041639 Hbb-bh2B2RVB7 147 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 AunipE9Q6Z5 340 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 S100a2J3QMC7 104 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 TstP52196 297 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Spag8Q3V0Q6 470 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Akt2Q60823 481 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Rhbdf1Q6PIX5 856 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tas2r110Q7M712 333 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr299Q7TS05 330 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ostm1Q8BGT0 338 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Aimp2Q8R010 320 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr643Q8VGY1 314 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ranbp3Q9CT10 491 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cypt12Q9DAR6 119 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Fam136b-psA0A140T8T1 138 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Klhdc7bA0A286YD60 1263 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cyp2w1E9Q816 493 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ptger3P30557 365 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gdf5P43027 495 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 VldlrP98156 873 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Sox4Q06831 440 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 CluQ06890 448 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Usf2Q64705 346 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Crtc1Q68ED7 630 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr1051Q7TR76 308 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 OptcQ920A0 328 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Npffr2Q924H0 417 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Emc3Q99KI3 261 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Otub2Q9CQX0 234 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 HhatlQ9D1G3 503 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 SrpraQ9DBG7 636 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Il1rl2Q9ERS7 574 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Sec61a2Q9JLR1 476 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 NagaQ9QWR8 415 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cdh17Q9R100 827 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ehd1Q9WVK4 534 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Kif13aQ9EQW7 1749 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Fam46aD3Z5S8 447 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Vmn2r85G3UW56 850 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Mthfd2P18155 350 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 TshrP47750 764 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tmem181aQ3U3W2 474 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Orm3Q63805 206 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 B3gnt5Q8BGY6 376 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr1325Q8VF43 315 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Znf639Q99KZ6 485 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Q9CZV2 255 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 GrifinQ9D1U0 144 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Calm4Q9JM83 148 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 PollQ9QXE2 573 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 PrebQ9WUQ2 417 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Zfp978A2A7I1 335 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ssxa1B1AUS7 101 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Esr1P19785 599 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ccr3P51678 359 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Rhox5P52651 210 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Nell1Q2VWQ2 810 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Zfp791Q497V9 528 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Krtcap2Q5RL79 136 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Uimc1Q5U5Q9 727 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr1080Q7TR67 313 aa9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Eif1axQ8BMJ3 144 aaKnown RBP9.52□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tmem185bQ8R3R5 350 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms