RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CACUL1Q86Y37 369 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 C11orf65Q8NCR3 313 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 TBC1D20Q96BZ9 403 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 COQ8BQ96D53 544 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ZFYVE19Q96K21 471 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 COPS4Q9BT78 406 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 MIR1-1HGQ9H1L0 117 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ADPRHL2Q9NX46 363 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 SPASTQ9UBP0 616 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 KCNE2Q9Y6J6 123 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 A0A0C4DFX4 3053 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 CKAP5Q14008 2032 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SERTM1A2A2V5 107 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 KRBA1A5PL33 1030 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SOBPA7XYQ1 873 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 WASH3PC4AMC7 463 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 ZSCAN9O15535 394 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-223ENST00000641597 UGDHO60701 494 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 FKTNO75072 461 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 ATP6V1G1O75348 118 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 LINC00271P0C7V0 271 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 MMP12P39900 470 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SELENOWP63302 87 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 C2orf80Q0P641 193 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 PROX2Q3B8N5 592 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 MED27Q6P2C8 311 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 NEK10Q6ZWH5 1172 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 HRASLS5Q96KN8 279 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SLIRPQ9GZT3 109 aaKnown RBP16.13■□□□□ 0.17
PHGDH-223ENST00000641597 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 RHOP08100 348 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 STSP08842 583 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SOAT1P35610 550 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 NFE2L1Q14494 772 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 UAP1L1Q3KQV9 507 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 RPS26P11Q5JNZ5 115 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-223ENST00000641597 KLHL17Q6TDP4 642 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SLC44A2Q8IWA5 706 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-223ENST00000641597 OR10G2Q8NGC3 310 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 SIGLEC11Q96RL6 698 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 BTNL2Q9UIR0 455 aa16.13■□□□□ 0.17
PHGDH-223ENST00000641597 PIPSLA2A3N6 862 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 SLC22A1O15245 554 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 TNFRSF21O75509 655 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 MAGP20916 626 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 GADD45AP24522 165 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 TP53BP2Q13625 1128 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF846Q147U1 533 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF805Q5CZA5 627 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PRSS48Q7RTY5 328 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 TRMT11Q7Z4G4 463 aaKnown RBP16.12■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF547Q8IVP9 402 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 LGI4Q8N135 537 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PSD4Q8NDX1 1056 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.12■□□□□ 0.17
PHGDH-223ENST00000641597 NXPE3Q969Y0 559 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PITX2Q99697 317 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 ROGDIQ9GZN7 287 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PCDHGB3Q9Y5G1 929 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 SNX8Q9Y5X2 465 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 EFCAB9A8MZ26 197 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 AP2A2O94973 939 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 CDH3P22223 829 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PTGER1P34995 402 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 PCGF2P35227 344 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 DCDC1P59894 354 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 SCARB2Q14108 478 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 CARTPTQ16568 116 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 FAM83HQ6ZRV2 1179 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-223ENST00000641597 P3H2Q8IVL5 708 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 VPS37AQ8NEZ2 397 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 OR6Q1Q8NGQ2 317 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 GGHQ92820 318 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 REEP4Q9H6H4 257 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 BRF2Q9HAW0 419 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 INIPQ9NRY2 104 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 SACM1LQ9NTJ5 587 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 CHCHD3Q9NX63 227 aaKnown RBP16.12■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF226Q9NYT6 803 aa16.12■□□□□ 0.17
PHGDH-223ENST00000641597 LOC100506127A0A0U1RQW1 187 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 IGFBP1P08833 259 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-223ENST00000641597 FURINP09958 794 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 CD97P48960 835 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 PRIM2P49643 509 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 CXCR4P61073 352 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 TAP2Q03519 686 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 KCNC4Q03721 635 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF763Q0D2J5 394 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 KCNC3Q14003 757 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 OXA1LQ15070 435 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 LEXMQ3ZCV2 418 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 OLIG3Q7RTU3 272 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 HMGN2P46Q86SG4 172 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 CPA6Q8N4T0 437 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 UCN3Q969E3 161 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 EPYCQ99645 322 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 HMG20AQ9NP66 347 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 RAB23Q9ULC3 237 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms