RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SNX31Q8N9S9 440 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 OR5T3Q8NGG3 340 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 BRIX1Q8TDN6 353 aaKnown RBP16.68■□□□□ 0.26
PTPN11-207ENST00000639857 ADAMTS18Q8TE60 1221 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 SLC44A1Q8WWI5 657 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 IFT81Q8WYA0 676 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 ISL2Q96A47 359 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 NPLQ9BXD5 320 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-207ENST00000639857 RHBGQ9H310 441 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 LUZP4Q9P127 313 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 TEKT2Q9UIF3 430 aa16.68■□□□□ 0.26
PTPN11-207ENST00000639857 A0A096LPK6 155 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 DYTNA2CJ06 578 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 LRIT2A6NDA9 550 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 SUPT3HB4E1H0 165 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 CCNT2O60583 730 aaKnown RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 SUPT3HO75486 399 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 KLHL2O95198 593 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 ACSL3O95573 720 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 RNH1P13489 461 aaKnown RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 CNTFP26441 200 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 SERPINB1P30740 379 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 KCNC1P48547 511 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 BMPR2Q13873 1038 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 ZNF169Q14929 603 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 NSDHLQ15738 373 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 UAP1Q16222 522 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 XKR6Q5GH73 641 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 METTL2BQ6P1Q9 378 aaKnown RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 LANCL3Q6ZV70 420 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 DNAJB14Q8TBM8 379 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 KCTD4Q8WVF5 259 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 EXT2Q93063 718 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 UBE2E3Q969T4 207 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 NXNL1Q96CM4 212 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 SNRNP40Q96DI7 357 aaKnown RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 MS4A6EQ96DS6 147 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 FAR2Q96K12 515 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 LPAR4Q99677 370 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 BARD1Q99728 777 aaKnown RBP16.67■□□□□ 0.26
PTPN11-207ENST00000639857 OPTCQ9UBM4 332 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 ZNF180Q9UJW8 692 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 IKBKGQ9Y6K9 419 aa16.67■□□□□ 0.26
PTPN11-207ENST00000639857 FLNCQ14315 2725 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 PRRC2CQ9Y520 2896 aaKnown RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 SYNDIG1LA6NDD5 238 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 K7EPI3 171 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 UBXN8O00124 270 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 PSMD12O00232 456 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 KLK8O60259 260 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 SEC24DO94855 1032 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 ALDOAP04075 364 aaKnown RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 MTHFD2P13995 350 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 EPORP19235 508 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 TYK2P29597 1187 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 MAGEA12P43365 314 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 RAB8AP61006 207 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 IRF8Q02556 426 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 TGM3Q08188 693 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 DOC2AQ14183 400 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 NAA30Q147X3 362 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 INAQ16352 499 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 HIST2H2ACQ16777 129 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 PRR30Q53SZ7 412 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 HIST2H2AA3Q6FI13 130 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 RPUSD3Q6P087 351 aaKnown RBP16.66■□□□□ 0.26
PTPN11-207ENST00000639857 TRIM40Q6P9F5 258 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 LINC00696Q6ZRV3 163 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 OR2L5Q8NG80 312 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 M1APQ8TC57 530 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 HAS2Q92819 552 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 ESAMQ96AP7 390 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 AICDAQ9GZX7 198 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 KLHL31Q9H511 634 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 MMP25Q9NPA2 562 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 PTGFRNQ9P2B2 879 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 MMACHCQ9Y4U1 282 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 RELNP78509 3460 aa16.66■□□□□ 0.26
PTPN11-207ENST00000639857 A0A087WUV0 522 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 CDK2AP1O14519 115 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 ERI3O43414 337 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 PRAMEF4O60810 478 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 CDC123O75794 336 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 KRT38O76015 456 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 UQCRHP07919 91 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 ABHD2P08910 425 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 ITGAMP11215 1152 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 HNRNPH1P31943 449 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 GMPRP36959 345 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 HNF4AP41235 474 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 ALDH18A1P54886 795 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 OLR1P78380 273 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 ARG2P78540 354 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 CHIT1Q13231 466 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 UBAP2LQ14157 1087 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 SETDB1Q15047 1291 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 BTBD16Q32M84 506 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 SFT2D3Q587I9 215 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 PRAMEF9Q5VWM5 478 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms