RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 GABRG2P18507 467 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 TTKP33981 857 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 PIGAP37287 484 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 RBM48Q5RL73 367 aaKnown RBP14.46□□□□□ -0.09
TRIM3-215ENST00000639856 SHQ1Q6PI26 577 aaKnown RBP14.46□□□□□ -0.09
TRIM3-215ENST00000639856 NXPE4Q6UWF7 544 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 USP30Q70CQ3 517 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 ARMCX6Q7L4S7 300 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 COMMD6Q7Z4G1 85 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 SYNPOQ8N3V7 929 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 ARL10Q8N8L6 244 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 ZFP90Q8TF47 636 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 SETD7Q8WTS6 366 aaKnown RBP14.46□□□□□ -0.09
TRIM3-215ENST00000639856 HMGB4Q8WW32 186 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 APOOQ9BUR5 198 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 CHST8Q9H2A9 424 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 VNN3Q9NY84 501 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 ATP6V1HQ9UI12 483 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 TMEFF2Q9UIK5 374 aaPredicted RBP14.46□□□□□ -0.09
TRIM3-215ENST00000639856 SCML1Q9UN30 329 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 CORO2BQ9UQ03 480 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 NCKAP1Q9Y2A7 1128 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 SLC17A4Q9Y2C5 497 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 PCDHGA8Q9Y5G5 932 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 TGFB1P01137 390 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 RAD23AP54725 363 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 PMS2P3Q13401 168 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 C16orf72Q14CZ0 275 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 RFX4Q33E94 735 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 EOGTQ5NDL2 527 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 OR2T5Q6IEZ7 315 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 KCTD8Q6ZWB6 473 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 CBLL1Q75N03 491 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 EIF3MQ7L2H7 374 aaKnown RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 GALNT10Q86SR1 603 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 DCP2Q8IU60 420 aaKnown RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 CLVS1Q8IUQ0 354 aaPredicted RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 DCUN1D3Q8IWE4 304 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 OR2T29Q8NH02 315 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 RAD51AP1Q96B01 352 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 C1QTNF7Q9BXJ2 289 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 BHLHE41Q9C0J9 482 aaPredicted RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 REEP4Q9H6H4 257 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 POLR1BQ9H9Y6 1135 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 TM9SF3Q9HD45 589 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 LTB4R2Q9NPC1 389 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 MMP17Q9ULZ9 603 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 VPS4AQ9UN37 437 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ABCG2Q9UNQ0 655 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 GPR89AB7ZAQ6 455 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 B4GAT1O43505 415 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ABCB1P08183 1280 aaPredicted RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 SLC35G4P0C7Q5 338 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 GPR89BP0CG08 455 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 MEF2AQ02078 507 aaPredicted RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 GAB1Q13480 694 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 TCEA2Q15560 299 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ZNF385BQ569K4 471 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ZC3H12BQ5HYM0 836 aaKnown RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ZNF773Q6PK81 442 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 OR5K2Q8NHB8 316 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 HDAC2Q92769 488 aaKnown RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ISOC1Q96CN7 298 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 SPNS1Q9H2V7 528 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 OR51B5Q9H339 312 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 CXorf21Q9HAI6 301 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 FGF22Q9HCT0 170 aa14.45□□□□□ -0.1
TRIM3-215ENST00000639856 ZNF282Q9UDV7 671 aaPredicted RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 DNMT3AQ9Y6K1 912 aaPredicted RBP14.45□□□□□ -0.1
TRIM3-215ENST00000639856 LOC100130705A0A1B0GUX0 176 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 FABP3P05413 133 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 CRHBPP24387 322 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 EEF1B2P24534 225 aaKnown RBP14.44□□□□□ -0.1
TRIM3-215ENST00000639856 PIK3CBP42338 1070 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 TPD52P55327 224 aaPredicted RBP14.44□□□□□ -0.1
TRIM3-215ENST00000639856 RAB39AQ14964 217 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 RGNQ15493 299 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 FBXO43Q4G163 708 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 PRAMEF14Q5SWL7 426 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 TPRG1LQ5T0D9 272 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 PRAMEF13Q5VWM6 474 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 TMEM26Q6ZUK4 368 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 VTCN1Q7Z7D3 282 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 OR4A15Q8NGL6 344 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 UBE2E3Q969T4 207 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 BTBD1Q9H0C5 482 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 GABARAPL1Q9H0R8 117 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 ATAD3AQ9NVI7 634 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 C2orf42Q9NWW7 574 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 TSC22D4Q9Y3Q8 395 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 GPSM3Q9Y4H4 160 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 ORC6Q9Y5N6 252 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 SLC16A6O15403 523 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 CPNE6O95741 557 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 GBAP04062 536 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 KELP23276 732 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 ARHGDIAP52565 204 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 VLDLRP98155 873 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 LCTLQ6UWM7 567 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 R3HCC1LQ7Z5L2 792 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms