RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 MYO1HQ8N1T3 1032 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 ANKRD53Q8N9V6 530 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 POGLUT1Q8NBL1 392 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 APCDD1LQ8NCL9 501 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 C16orf52Q8NHV5 167 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 TMEM125Q96AQ2 219 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 LINGO1Q96FE5 620 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 SMIM10Q96HG1 83 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 SLC6A16Q9GZN6 736 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 AICDAQ9GZX7 198 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 NPDC1Q9NQX5 325 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 TAS2R13Q9NYV9 303 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 ZFP69BQ9UJL9 534 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 MAD1L1Q9Y6D9 718 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 SCN2AQ99250 2005 aa11.34□□□□□ -0.59
CACNA1A-250ENST00000637809 DNHD1Q96M86 4753 aa11.33□□□□□ -0.59
CACNA1A-250ENST00000637809 ZNF469Q96JG9 3925 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 C4orf51C9J302 202 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 TFECO14948 347 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 HS6ST1O60243 411 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 SERPIND1P05546 499 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 AHRP35869 848 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 NR0B1P51843 470 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 PGGT1BP53609 377 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 RGS1Q08116 209 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CRYMQ14894 314 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CYP1B1Q16678 543 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 NIPAL1Q6NVV3 410 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 ABHD13Q7L211 337 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 MDGA2Q7Z553 956 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CD163Q86VB7 1156 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CNTN4Q8IWV2 1026 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 PALM2Q8IXS6 379 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 EID3Q8N140 333 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 ZFP62Q8NB50 900 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 TRIM58Q8NG06 486 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 NEIL2Q969S2 332 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 MAGOHBQ96A72 148 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 FBXL8Q96CD0 374 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 KLHL31Q9H511 634 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CLK4Q9HAZ1 481 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 IGSF5Q9NSI5 407 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 ARL15Q9NXU5 204 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 COQ3Q9NZJ6 369 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 ZFATQ9P243 1243 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 ZNF223Q9UK11 482 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 IKZF3Q9UKT9 509 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 KLF13Q9Y2Y9 288 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CLDN16Q9Y5I7 305 aa11.33□□□□□ -0.6
CACNA1A-250ENST00000637809 CACNA1CQ13936 2221 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 TRBV11-1A0A0K0K1C0 115 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 A8MUA0 341 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 FCHO1O14526 889 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 FANCGO15287 622 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 PEX1O43933 1283 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 TOXO94900 526 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 AHSGP02765 367 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 TPOP07202 933 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 HIST1H2AGP0C0S8 130 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 PGAM1P18669 254 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 TFEBP19484 476 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 AP1S2P56377 157 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 RAB8AP61006 207 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 SKP1P63208 163 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 REEP5Q00765 189 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 EMC4Q5J8M3 183 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 KIAA0408Q6ZU52 694 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 RPRMLQ8N4K4 120 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 SLC5A11Q8WWX8 675 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 MS4A14Q96JA4 679 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 TSNARE1Q96NA8 513 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 DEFB126Q9BYW3 111 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 PLAC1Q9HBJ0 212 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 SLC17A6Q9P2U8 582 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 TNFRSF10DQ9UBN6 386 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 PPIEQ9UNP9 301 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 SPG11Q96JI7 2443 aa11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 MAP1AP78559 2803 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.6
CACNA1A-250ENST00000637809 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 NKX2-6A6NCS4 301 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 TMEM200CA6NKL6 621 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 TGFBR3LH3BV60 316 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CDC40O60508 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CCDC175P0C221 793 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 RNH1P13489 461 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CHRNB4P30926 498 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 HNF4AP41235 474 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms