RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 F2RL3Q96RI0 385 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 GPATCH1Q9BRR8 931 aaKnown RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 TBCDQ9BTW9 1192 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 CHRNA10Q9GZZ6 450 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 DDX31Q9H8H2 851 aaKnown RBP14.64□□□□□ -0.07
CLN6-219ENST00000637329 C1GALT1Q9NS00 363 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 ATAD3AQ9NVI7 634 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 MAP10Q9P2G4 905 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 ABCD2Q9UBJ2 740 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 ATP6V1HQ9UI12 483 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 PCDHGA5Q9Y5G8 931 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 RNF215Q9Y6U7 377 aa14.64□□□□□ -0.07
CLN6-219ENST00000637329 CACNA1EQ15878 2313 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 SAP18O00422 153 aaKnown RBP14.63□□□□□ -0.07
CLN6-219ENST00000637329 DUX1O43812 170 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 TBX19O60806 448 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 CTSVO60911 334 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 SH3BGRLO75368 114 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 RASSF9O75901 435 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 KCNH1O95259 989 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 SYPP08247 313 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 COX7A2P14406 83 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 HOXB3P14651 431 aaPredicted RBP14.63□□□□□ -0.07
CLN6-219ENST00000637329 TYRP1P17643 537 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 CDH3P22223 829 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 SSR2P43308 183 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 LSSP48449 732 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 MAPK12P53778 367 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 CYP4F3Q08477 520 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 MAPKAPK3Q16644 382 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 UGT8Q16880 541 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 HKDC1Q2TB90 917 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 TOR1AIP1Q5JTV8 583 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 CCNYL2Q5T2Q4 361 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 OR4C11Q6IEV9 310 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 FAM71E1Q6IPT2 247 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 NET1Q7Z628 596 aaPredicted RBP14.63□□□□□ -0.07
CLN6-219ENST00000637329 GPR180Q86V85 440 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 FBXW8Q8N3Y1 598 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 ZCCHC7Q8N3Z6 543 aaKnown RBP14.63□□□□□ -0.07
CLN6-219ENST00000637329 FAM181AQ8N9Y4 354 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 CAMKVQ8NCB2 501 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 WDR48Q8TAF3 677 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 C16orf78Q8WTQ4 265 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 RERGQ96A58 199 aaPredicted RBP14.63□□□□□ -0.07
CLN6-219ENST00000637329 LRRC58Q96CX6 371 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 MS4A6EQ96DS6 147 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 ZDHHC12Q96GR4 267 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 EGLN2Q96KS0 407 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 OR52E6Q96RD3 313 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 ROGDIQ9GZN7 287 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 REEP4Q9H6H4 257 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 LHX9Q9NQ69 397 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 LRIT1Q9P2V4 623 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 KLHL20Q9Y2M5 609 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
CLN6-219ENST00000637329 R4GN57 208 aa14.63□□□□□ -0.07
CLN6-219ENST00000637329 A0A0A6YYD5 115 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ARHGAP33O14559 1287 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ZSCAN9O15535 394 aaPredicted RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 ERI3O43414 337 aaKnown RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 DNAJA2O60884 412 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 GUCY1B2O75343 617 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ERN1O75460 977 aaKnown RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 SERPIND1P05546 499 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 KLK1P06870 262 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ZNF10P21506 573 aaPredicted RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 DGKQP52824 942 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 KLC1Q07866 573 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 TRIM61Q5EBN2 209 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 PIGGQ5H8A4 983 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ZC3H12BQ5HYM0 836 aaKnown RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 PAGE3Q5JUK9 113 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 SAMD4BQ5PRF9 694 aaKnown RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 WASHC2DQ5SRD0 308 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 LRIF1Q5T3J3 769 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ANXA8L1Q5VT79 327 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 CYB5D1Q6P9G0 228 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ABHD17CQ6PCB6 329 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 SLC2A7Q6PXP3 512 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 UBE3DQ7Z6J8 389 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 NATD1Q8N6N6 113 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 CDC26Q8NHZ8 85 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 GTF2H4Q92759 462 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 TCTN2Q96GX1 697 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 ITCHQ96J02 903 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 TRAPPC9Q96Q05 1148 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 NLNQ9BYT8 704 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 BHLHE41Q9C0J9 482 aaPredicted RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 GAREM1Q9H706 876 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 TMEM181Q9P2C4 612 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 SLC7A8Q9UHI5 535 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 AP3M1Q9Y2T2 418 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 HEATR5BQ9P2D3 2071 aa14.62□□□□□ -0.07
CLN6-219ENST00000637329 MN1Q10571 1320 aaPredicted RBP14.62□□□□□ -0.07
CLN6-219ENST00000637329 BAHCC1Q9P281 2608 aa14.61□□□□□ -0.07
CLN6-219ENST00000637329 IGHV1OR21-1A0A087WYE8 117 aa14.61□□□□□ -0.07
CLN6-219ENST00000637329 A0A096LPI6 279 aa14.61□□□□□ -0.07
CLN6-219ENST00000637329 TRIM38O00635 465 aa14.61□□□□□ -0.07
CLN6-219ENST00000637329 PCDHGA12O60330 932 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms